Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC004832.4-201ENST00000608952 331 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL591926.4-201ENST00000616895 298 ntBASIC1.21□□□□□ -2.22
KRT3P12035 AL391987.6-201ENST00000305671 199 ntBASIC1.2□□□□□ -2.22
KRT3P12035 Y_RNA.112-201ENST00000363250 102 ntBASIC1.2□□□□□ -2.22
KRT3P12035 Y_RNA.509-201ENST00000384506 99 ntBASIC1.2□□□□□ -2.22
KRT3P12035 MIR891A-201ENST00000401237 79 ntBASIC1.2□□□□□ -2.22
KRT3P12035 Y_RNA.602-201ENST00000410535 92 ntBASIC1.2□□□□□ -2.22
KRT3P12035 RPL39P38-201ENST00000467018 153 ntBASIC1.2□□□□□ -2.22
KRT3P12035 RNU6-1046P-201ENST00000516538 107 ntBASIC1.2□□□□□ -2.22
KRT3P12035 C8orf59P2-201ENST00000603441 271 ntBASIC1.2□□□□□ -2.22
KRT3P12035 AL160413.1-201ENST00000622780 310 ntBASIC1.2□□□□□ -2.22
KRT3P12035 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
KRT3P12035 Y_RNA.462-201ENST00000384268 102 ntBASIC1.19□□□□□ -2.22
KRT3P12035 Y_RNA.551-201ENST00000384661 102 ntBASIC1.19□□□□□ -2.22
KRT3P12035 AL590004.1-201ENST00000405321 300 ntBASIC1.19□□□□□ -2.22
KRT3P12035 MIR1302-11-201ENST00000408051 138 ntBASIC1.19□□□□□ -2.22
KRT3P12035 MIR1302-9-201ENST00000408365 138 ntBASIC1.19□□□□□ -2.22
KRT3P12035 MIR1302-10-201ENST00000408734 138 ntBASIC1.19□□□□□ -2.22
KRT3P12035 RNU6-101P-201ENST00000410323 104 ntBASIC1.19□□□□□ -2.22
KRT3P12035 POLR2KP2-201ENST00000438155 177 ntBASIC1.19□□□□□ -2.22
KRT3P12035 AC114811.1-201ENST00000507207 168 ntBASIC1.19□□□□□ -2.22
KRT3P12035 RNU7-40P-201ENST00000516397 64 ntBASIC1.19□□□□□ -2.22
KRT3P12035 RNU6-988P-201ENST00000519081 107 ntBASIC1.19□□□□□ -2.22
KRT3P12035 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRT3P12035 AL358944.1-201ENST00000528537 144 ntBASIC1.19□□□□□ -2.22
KRT3P12035 MIR1302-2-201ENST00000607096 138 ntBASIC1.19□□□□□ -2.22
KRT3P12035 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.19□□□□□ -2.22
KRT3P12035 Y_RNA.361-201ENST00000365515 120 ntBASIC1.18□□□□□ -2.22
KRT3P12035 MIR222-201ENST00000384992 110 ntBASIC1.18□□□□□ -2.22
KRT3P12035 OR2A41P-201ENST00000473586 105 ntBASIC1.18□□□□□ -2.22
KRT3P12035 AC117454.1-201ENST00000491120 168 ntBASIC1.18□□□□□ -2.22
KRT3P12035 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.18□□□□□ -2.22
KRT3P12035 POLR3GP1-201ENST00000594073 261 ntBASIC1.18□□□□□ -2.22
KRT3P12035 AC120024.3-201ENST00000603167 156 ntBASIC1.18□□□□□ -2.22
KRT3P12035 AL513534.2-201ENST00000603836 250 ntBASIC1.18□□□□□ -2.22
KRT3P12035 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
KRT3P12035 Y_RNA.61-201ENST00000362835 102 ntBASIC1.17□□□□□ -2.22
KRT3P12035 SNORD81.1-201ENST00000363064 77 ntBASIC1.17□□□□□ -2.22
KRT3P12035 Y_RNA.383-201ENST00000383855 97 ntBASIC1.17□□□□□ -2.22
KRT3P12035 RNU6-474P-201ENST00000384243 107 ntBASIC1.17□□□□□ -2.22
KRT3P12035 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
KRT3P12035 RNU6-130P-201ENST00000411112 103 ntBASIC1.17□□□□□ -2.22
KRT3P12035 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
KRT3P12035 MTCO2P12-201ENST00000427426 682 ntBASIC1.17□□□□□ -2.22
KRT3P12035 RPL23AP54-201ENST00000495129 419 ntBASIC1.17□□□□□ -2.22
KRT3P12035 SEPT14P8-201ENST00000508026 178 ntBASIC1.17□□□□□ -2.22
KRT3P12035 RNU6-917P-201ENST00000516294 104 ntBASIC1.17□□□□□ -2.22
KRT3P12035 AC090049.2-201ENST00000550377 109 ntBASIC1.17□□□□□ -2.22
KRT3P12035 PART1_1.1-201ENST00000611761 217 ntBASIC1.17□□□□□ -2.22
KRT3P12035 SNORD42.2-201ENST00000365570 69 ntBASIC1.16□□□□□ -2.22
KRT3P12035 Y_RNA.394-201ENST00000383942 103 ntBASIC1.16□□□□□ -2.22
KRT3P12035 Y_RNA.395-201ENST00000383945 109 ntBASIC1.16□□□□□ -2.22
KRT3P12035 SNORA72-201ENST00000384339 132 ntBASIC1.16□□□□□ -2.22
KRT3P12035 MIR516B2-201ENST00000385190 85 ntBASIC1.16□□□□□ -2.22
KRT3P12035 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.16□□□□□ -2.22
KRT3P12035 Y_RNA.604-201ENST00000410574 102 ntBASIC1.16□□□□□ -2.22
KRT3P12035 PMCHL1-202ENST00000423102 261 ntBASIC1.16□□□□□ -2.22
KRT3P12035 Y_RNA.631-201ENST00000459607 101 ntBASIC1.16□□□□□ -2.22
KRT3P12035 CYCTP-201ENST00000504253 315 ntBASIC1.16□□□□□ -2.22
KRT3P12035 AC022616.4-201ENST00000522985 181 ntBASIC1.16□□□□□ -2.22
KRT3P12035 MIR4423-201ENST00000580922 80 ntBASIC1.16□□□□□ -2.22
KRT3P12035 GHRLOS.1-201ENST00000610995 70 ntBASIC1.16□□□□□ -2.22
KRT3P12035 MIRLET7C-201ENST00000362160 84 ntBASIC1.15□□□□□ -2.23
KRT3P12035 Y_RNA.28-201ENST00000362554 111 ntBASIC1.15□□□□□ -2.23
KRT3P12035 SNORD113-8-201ENST00000363497 74 ntBASIC1.15□□□□□ -2.23
KRT3P12035 Y_RNA.253-201ENST00000364562 112 ntBASIC1.15□□□□□ -2.23
KRT3P12035 Y_RNA.286-201ENST00000364813 102 ntBASIC1.15□□□□□ -2.23
KRT3P12035 SNORA2.2-201ENST00000365473 135 ntBASIC1.15□□□□□ -2.23
KRT3P12035 SNRPGP10-201ENST00000432323 225 ntBASIC1.15□□□□□ -2.23
KRT3P12035 RPL39P39-201ENST00000455840 151 ntBASIC1.15□□□□□ -2.23
KRT3P12035 Y_RNA.639-201ENST00000458981 102 ntBASIC1.15□□□□□ -2.23
KRT3P12035 RNU6-475P-201ENST00000516073 104 ntBASIC1.15□□□□□ -2.23
KRT3P12035 SNORA40.15-201ENST00000516884 107 ntBASIC1.15□□□□□ -2.23
KRT3P12035 SNORD113-5-201ENST00000607261 78 ntBASIC1.15□□□□□ -2.23
KRT3P12035 snoU13.31-201ENST00000607291 104 ntBASIC1.15□□□□□ -2.23
KRT3P12035 MIR376A1-201ENST00000616574 68 ntBASIC1.15□□□□□ -2.23
KRT3P12035 RNU4-80P-201ENST00000363200 141 ntBASIC1.14□□□□□ -2.23
KRT3P12035 Y_RNA.138-201ENST00000363462 102 ntBASIC1.14□□□□□ -2.23
KRT3P12035 Y_RNA.148-201ENST00000363557 117 ntBASIC1.14□□□□□ -2.23
KRT3P12035 U8.7-201ENST00000364940 136 ntBASIC1.14□□□□□ -2.23
KRT3P12035 SNORD63-201ENST00000384262 68 ntBASIC1.14□□□□□ -2.23
KRT3P12035 Y_RNA.535-201ENST00000384612 99 ntBASIC1.14□□□□□ -2.23
KRT3P12035 MIR802-201ENST00000390235 94 ntBASIC1.14□□□□□ -2.23
KRT3P12035 RNU6-131P-201ENST00000391144 107 ntBASIC1.14□□□□□ -2.23
KRT3P12035 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.14□□□□□ -2.23
KRT3P12035 AC010655.3-201ENST00000478818 450 ntBASIC1.14□□□□□ -2.23
KRT3P12035 Y_RNA.714-201ENST00000517065 90 ntBASIC1.14□□□□□ -2.23
KRT3P12035 Y_RNA.715-201ENST00000517082 110 ntBASIC1.14□□□□□ -2.23
KRT3P12035 AC024405.2-202ENST00000532731 184 ntBASIC1.14□□□□□ -2.23
KRT3P12035 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.14□□□□□ -2.23
KRT3P12035 AC104695.3-201ENST00000604052 296 ntBASIC1.14□□□□□ -2.23
KRT3P12035 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.14□□□□□ -2.23
KRT3P12035 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
KRT3P12035 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
KRT3P12035 AC134026.1-201ENST00000623249 2239 ntBASIC1.13□□□□□ -2.23
KRT3P12035 Y_RNA.128-201ENST00000363391 112 ntBASIC1.13□□□□□ -2.23
KRT3P12035 RNU6-833P-201ENST00000363486 107 ntBASIC1.13□□□□□ -2.23
KRT3P12035 RNU6-1048P-201ENST00000364054 107 ntBASIC1.13□□□□□ -2.23
KRT3P12035 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
KRT3P12035 SNORA70.7-201ENST00000384159 133 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms