Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 RNU6-1132P-201ENST00000459214 107 ntBASIC1.72□□□□□ -2.13
PCNAP12004 Y_RNA.641-201ENST00000459414 105 ntBASIC1.72□□□□□ -2.13
PCNAP12004 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
PCNAP12004 MIR3149-201ENST00000584629 83 ntBASIC1.72□□□□□ -2.13
PCNAP12004 AP003357.1-201ENST00000604497 148 ntBASIC1.72□□□□□ -2.13
PCNAP12004 AL008718.3-201ENST00000610217 321 ntBASIC1.72□□□□□ -2.13
PCNAP12004 AC021506.2-201ENST00000612354 169 ntBASIC1.72□□□□□ -2.13
PCNAP12004 snoU18.1-201ENST00000629629 71 ntBASIC1.72□□□□□ -2.13
PCNAP12004 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.13
PCNAP12004 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCNAP12004 Y_RNA.14-201ENST00000362415 103 ntBASIC1.71□□□□□ -2.14
PCNAP12004 Y_RNA.54-201ENST00000362766 105 ntBASIC1.71□□□□□ -2.14
PCNAP12004 Y_RNA.265-201ENST00000364677 108 ntBASIC1.71□□□□□ -2.14
PCNAP12004 Y_RNA.275-201ENST00000364726 110 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RNU6-1323P-201ENST00000384025 107 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RNU6-1289P-201ENST00000384431 106 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RNU6-1031P-201ENST00000384773 107 ntBASIC1.71□□□□□ -2.14
PCNAP12004 AL603910.2-201ENST00000407268 136 ntBASIC1.71□□□□□ -2.14
PCNAP12004 MTND4LP30-201ENST00000454092 297 ntBASIC1.71□□□□□ -2.14
PCNAP12004 HMGN2P23-201ENST00000456759 269 ntBASIC1.71□□□□□ -2.14
PCNAP12004 AC005908.1-201ENST00000468701 347 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RPL23AP54-201ENST00000495129 419 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RPS29P11-201ENST00000496507 171 ntBASIC1.71□□□□□ -2.14
PCNAP12004 MTND1P19-201ENST00000511780 315 ntBASIC1.71□□□□□ -2.14
PCNAP12004 RNU6-970P-201ENST00000516312 107 ntBASIC1.71□□□□□ -2.14
PCNAP12004 Y_RNA.680-201ENST00000516441 93 ntBASIC1.71□□□□□ -2.14
PCNAP12004 MIR3618-201ENST00000580330 88 ntBASIC1.71□□□□□ -2.14
PCNAP12004 AC005357.1-201ENST00000588399 301 ntBASIC1.71□□□□□ -2.14
PCNAP12004 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PCNAP12004 UBE2WP1-201ENST00000362030 340 ntBASIC1.7□□□□□ -2.14
PCNAP12004 RNU4-41P-201ENST00000364426 143 ntBASIC1.7□□□□□ -2.14
PCNAP12004 RNU6-702P-201ENST00000364982 107 ntBASIC1.7□□□□□ -2.14
PCNAP12004 Y_RNA.452-201ENST00000384202 108 ntBASIC1.7□□□□□ -2.14
PCNAP12004 SNORA72-201ENST00000384339 132 ntBASIC1.7□□□□□ -2.14
PCNAP12004 MIR9-3-201ENST00000385084 90 ntBASIC1.7□□□□□ -2.14
PCNAP12004 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
PCNAP12004 RNU6-360P-201ENST00000390944 104 ntBASIC1.7□□□□□ -2.14
PCNAP12004 RNU11-5P-201ENST00000391216 129 ntBASIC1.7□□□□□ -2.14
PCNAP12004 MIR1278-201ENST00000408753 81 ntBASIC1.7□□□□□ -2.14
PCNAP12004 RN7SKP200-201ENST00000410564 320 ntBASIC1.7□□□□□ -2.14
PCNAP12004 AL049830.1-201ENST00000468034 425 ntBASIC1.7□□□□□ -2.14
PCNAP12004 UBL5P3-201ENST00000475112 231 ntBASIC1.7□□□□□ -2.14
PCNAP12004 RNA5SP182-201ENST00000516064 82 ntBASIC1.7□□□□□ -2.14
PCNAP12004 AC127455.1-201ENST00000565496 145 ntBASIC1.7□□□□□ -2.14
PCNAP12004 MIR4643-201ENST00000577473 78 ntBASIC1.7□□□□□ -2.14
PCNAP12004 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.7□□□□□ -2.14
PCNAP12004 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PCNAP12004 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
PCNAP12004 RNU6-414P-201ENST00000363705 104 ntBASIC1.69□□□□□ -2.14
PCNAP12004 Y_RNA.277-201ENST00000364754 102 ntBASIC1.69□□□□□ -2.14
PCNAP12004 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
PCNAP12004 Y_RNA.556-201ENST00000384677 113 ntBASIC1.69□□□□□ -2.14
PCNAP12004 SNORA36B-201ENST00000410438 131 ntBASIC1.69□□□□□ -2.14
PCNAP12004 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.69□□□□□ -2.14
PCNAP12004 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.69□□□□□ -2.14
PCNAP12004 CALM2P4-201ENST00000430810 426 ntBASIC1.69□□□□□ -2.14
PCNAP12004 Z98949.2-201ENST00000440996 144 ntBASIC1.69□□□□□ -2.14
PCNAP12004 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.69□□□□□ -2.14
PCNAP12004 OR9P1P-201ENST00000496431 281 ntBASIC1.69□□□□□ -2.14
PCNAP12004 Y_RNA.673-201ENST00000516306 88 ntBASIC1.69□□□□□ -2.14
PCNAP12004 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.69□□□□□ -2.14
PCNAP12004 AL591926.4-201ENST00000616895 298 ntBASIC1.69□□□□□ -2.14
PCNAP12004 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
PCNAP12004 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.69□□□□□ -2.14
PCNAP12004 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.68□□□□□ -2.14
PCNAP12004 RNU6-661P-201ENST00000362409 107 ntBASIC1.68□□□□□ -2.14
PCNAP12004 RNU4-10P-201ENST00000364383 140 ntBASIC1.68□□□□□ -2.14
PCNAP12004 Y_RNA.253-201ENST00000364562 112 ntBASIC1.68□□□□□ -2.14
PCNAP12004 Y_RNA.307-201ENST00000365022 117 ntBASIC1.68□□□□□ -2.14
PCNAP12004 RNU7-116P-201ENST00000516940 62 ntBASIC1.68□□□□□ -2.14
PCNAP12004 RNU6-1116P-201ENST00000517269 99 ntBASIC1.68□□□□□ -2.14
PCNAP12004 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.68□□□□□ -2.14
PCNAP12004 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.68□□□□□ -2.14
PCNAP12004 AC062037.2-201ENST00000610137 73 ntBASIC1.68□□□□□ -2.14
PCNAP12004 AC013791.1-201ENST00000616619 62 ntBASIC1.68□□□□□ -2.14
PCNAP12004 AC084768.2-201ENST00000622736 221 ntBASIC1.68□□□□□ -2.14
PCNAP12004 SNORD68-201ENST00000363214 84 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RNU6-899P-201ENST00000363947 107 ntBASIC1.67□□□□□ -2.14
PCNAP12004 SNORD27-201ENST00000363981 72 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RNA5SP363-201ENST00000365072 115 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RNU6-211P-201ENST00000384047 107 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RNU6-950P-201ENST00000384651 107 ntBASIC1.67□□□□□ -2.14
PCNAP12004 Y_RNA.562-201ENST00000384695 113 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
PCNAP12004 U8.16-201ENST00000391279 133 ntBASIC1.67□□□□□ -2.14
PCNAP12004 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
PCNAP12004 MIR1267-201ENST00000408723 78 ntBASIC1.67□□□□□ -2.14
PCNAP12004 RPL39P38-201ENST00000467018 153 ntBASIC1.67□□□□□ -2.14
PCNAP12004 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
PCNAP12004 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.67□□□□□ -2.14
PCNAP12004 MIR3128-201ENST00000581957 66 ntBASIC1.67□□□□□ -2.14
PCNAP12004 MIR8081-201ENST00000611533 95 ntBASIC1.67□□□□□ -2.14
PCNAP12004 MIR8074-201ENST00000615081 81 ntBASIC1.67□□□□□ -2.14
PCNAP12004 AL078604.3-201ENST00000615580 211 ntBASIC1.67□□□□□ -2.14
PCNAP12004 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.67□□□□□ -2.14
PCNAP12004 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.66□□□□□ -2.14
PCNAP12004 MIR424-201ENST00000362227 98 ntBASIC1.66□□□□□ -2.14
PCNAP12004 Y_RNA.203-201ENST00000364106 102 ntBASIC1.66□□□□□ -2.14
PCNAP12004 MIR562-201ENST00000384894 95 ntBASIC1.66□□□□□ -2.14
PCNAP12004 RNU6-383P-201ENST00000410864 94 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms