Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 MIR942-201ENST00000401111 86 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-855P-201ENST00000410395 104 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 MCFD2P1-201ENST00000417812 300 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 AL603825.1-201ENST00000438481 80 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 snoU13.25-201ENST00000458945 104 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 RNU7-90P-201ENST00000459216 62 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 AC005730.3-201ENST00000583067 366 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 UBE2V2P2-201ENST00000587677 504 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 FAM71BP1-201ENST00000604431 523 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 AL020996.3-201ENST00000606617 222 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 AC084781.2-201ENST00000615568 161 ntBASIC0.7□□□□□ -2.3
IGHV3-43DP0DP04 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 snoU2-30.1-201ENST00000365012 70 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.570-201ENST00000384750 101 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-131P-201ENST00000391144 107 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-710P-201ENST00000410424 105 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 AC005042.3-201ENST00000453230 174 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 U8.19-201ENST00000459095 133 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 SNORD45.4-201ENST00000516629 73 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 SNORA74.3-201ENST00000517108 154 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 SNORD116.3-201ENST00000517176 78 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 AL132765.2-201ENST00000610812 351 ntBASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
IGHV3-43DP0DP04 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 SNORD14.1-201ENST00000365609 90 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 AC117470.1-201ENST00000381974 330 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.463-201ENST00000384271 102 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 MIR520C-201ENST00000385005 87 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 MIR15B-201ENST00000385045 98 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 AL390729.2-201ENST00000416137 156 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 MTCO2P27-201ENST00000420740 428 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 SNRPGP10-201ENST00000432323 225 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 HMGN2P32-201ENST00000444648 269 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 ACA64.5-201ENST00000516207 127 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 AC090142.3-201ENST00000519012 385 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 MIR4272-201ENST00000635924 64 ntBASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
IGHV3-43DP0DP04 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 MIR103A2-201ENST00000362154 78 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 SNORA72.1-201ENST00000363485 129 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-1283P-201ENST00000365314 105 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.632-201ENST00000459189 102 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-1053P-201ENST00000515930 101 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.661-201ENST00000516003 99 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-113P-201ENST00000516653 101 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 SNORA18.7-201ENST00000516910 131 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.714-201ENST00000517065 90 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 AL355375.2-201ENST00000574825 175 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 MIR3124-201ENST00000582636 67 ntBASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.67□□□□□ -2.3
IGHV3-43DP0DP04 MIR96-201ENST00000362288 78 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 RNU6-1187P-201ENST00000364771 110 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 SNORD50B-201ENST00000364995 70 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.331-201ENST00000365267 102 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.341-201ENST00000365341 102 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 RNU7-41P-201ENST00000515917 61 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 MIR4423-201ENST00000580922 80 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 MIR4781-201ENST00000585250 76 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 RBM11P1-201ENST00000604951 799 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.772-201ENST00000606692 102 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 AC106800.4-201ENST00000614905 153 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 AC010205.1-201ENST00000616668 449 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
IGHV3-43DP0DP04 Y_RNA.39-201ENST00000362620 98 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.70-201ENST00000362886 110 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 Y_RNA.187-201ENST00000363918 113 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-1323P-201ENST00000384025 107 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AL590004.1-201ENST00000405321 300 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC024067.1-201ENST00000426199 223 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 RNU7-152P-201ENST00000458982 64 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-351P-201ENST00000516097 100 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 RNU6-197P-201ENST00000516680 100 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 RNU7-116P-201ENST00000516940 62 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 MIR4764-201ENST00000580680 88 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 POLR3GP1-201ENST00000594073 261 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 DEFB117-201ENST00000602356 141 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC092447.9-201ENST00000603395 144 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.31
IGHV3-43DP0DP04 MIR6857-201ENST00000613267 93 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms