Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 SNORD115-3-201ENST00000363100 82 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 Y_RNA.121-201ENST00000363309 113 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 RNU6-144P-201ENST00000383951 107 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 RNU6-376P-201ENST00000384731 106 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 MT-TT-201ENST00000387460 66 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 MIR526A2-201ENST00000390198 65 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 RNU6-1186P-201ENST00000410429 97 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 RNU4-61P-201ENST00000411243 107 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 AC003989.2-201ENST00000440224 169 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRPA1P09661 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRPA1P09661 RPL23AP63-201ENST00000498752 471 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.44□□□□□ -2.02
SNRPA1P09661 MIR3133-201ENST00000583157 78 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 U6.73-201ENST00000619194 103 ntBASIC2.44□□□□□ -2.02
SNRPA1P09661 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.44□□□□□ -2.02
SNRPA1P09661 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SNRPA1P09661 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
SNRPA1P09661 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNRPA1P09661 Y_RNA.170-201ENST00000363746 110 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 SNORA3A-201ENST00000364113 130 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 RNA5SP467-201ENST00000391274 118 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 RNU6-1135P-201ENST00000411083 103 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 AC010154.1-201ENST00000425857 269 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.43□□□□□ -2.02
SNRPA1P09661 RNU7-116P-201ENST00000516940 62 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 MTND5P41-201ENST00000517498 206 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 MIR3144-201ENST00000579460 79 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 AC245060.5-201ENST00000610778 3293 ntBASIC2.43□□□□□ -2.02
SNRPA1P09661 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SNRPA1P09661 Y_RNA.75-201ENST00000362927 97 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 SNORA33-201ENST00000363664 130 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 Y_RNA.229-201ENST00000364347 113 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 RNU6-187P-201ENST00000384139 106 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 Y_RNA.506-201ENST00000384494 102 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 RNU6-160P-201ENST00000384591 107 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 RNU6-394P-201ENST00000410735 107 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 EDDM3CP-201ENST00000415977 425 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 EBAG9P1-201ENST00000418955 543 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 SEPT7P4-201ENST00000437076 306 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 RPS4XP11-201ENST00000446897 772 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 RNU6-1146P-201ENST00000516282 102 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 MIR4744-201ENST00000581563 82 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 AC073413.2-201ENST00000604332 360 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 AC108706.1-201ENST00000611053 297 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 MIR338-201ENST00000636369 67 ntBASIC2.42□□□□□ -2.02
SNRPA1P09661 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNRPA1P09661 RNU6-275P-201ENST00000364910 107 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 Y_RNA.398-201ENST00000383952 99 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 RNU6-746P-201ENST00000384112 109 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 RNU6-125P-201ENST00000384505 107 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 RNU6-578P-201ENST00000390980 103 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 MIR1278-201ENST00000408753 81 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
SNRPA1P09661 RNU6-437P-201ENST00000459408 95 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 RNA5SP458-201ENST00000516188 119 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 AC002984.1-201ENST00000591692 448 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 AL929325.1-201ENST00000603096 117 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 AC012640.5-201ENST00000623897 319 ntBASIC2.41□□□□□ -2.02
SNRPA1P09661 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.41□□□□□ -2.02
SNRPA1P09661 Y_RNA.23-201ENST00000362496 106 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 RNU6-103P-201ENST00000363686 107 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 RNU1-96P-201ENST00000364163 162 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 RNU6-1164P-201ENST00000364428 107 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 Y_RNA.441-201ENST00000384123 112 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 SNORA72-201ENST00000384339 132 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 MIR9-3-201ENST00000385084 90 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 MIR616-201ENST00000385293 97 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 AL353689.1-201ENST00000438895 199 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 ATP5J2P3-201ENST00000451550 258 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 RNU7-128P-201ENST00000517247 62 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 CYCSP26-201ENST00000534107 320 ntBASIC2.4□□□□□ -2.03
SNRPA1P09661 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.4□□□□□ -2.03
SNRPA1P09661 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SNRPA1P09661 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SNRPA1P09661 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SNRPA1P09661 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNRPA1P09661 RNA5SP493-201ENST00000364115 91 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 RNU6-312P-201ENST00000364629 107 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 Y_RNA.272-201ENST00000364696 102 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 SNORA6-201ENST00000384033 151 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 SNORD23.1-201ENST00000408212 104 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 RNU1-131P-201ENST00000458943 161 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.39□□□□□ -2.03
SNRPA1P09661 RNU6-346P-201ENST00000516288 111 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 RNU1-40P-201ENST00000516816 164 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 Y_RNA.703-201ENST00000516846 111 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 RNU1-97P-201ENST00000516872 164 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.39□□□□□ -2.03
SNRPA1P09661 AC109810.1-201ENST00000534066 224 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.39□□□□□ -2.03
SNRPA1P09661 AC007229.1-201ENST00000590455 412 ntBASIC2.39□□□□□ -2.03
SNRPA1P09661 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SNRPA1P09661 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SNRPA1P09661 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNRPA1P09661 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNRPA1P09661 RNU4-41P-201ENST00000364426 143 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms