Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SNORA25.10-201ENST00000515926 124 ntBASIC0.7□□□□□ -2.3
CAPN1P07384 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.7□□□□□ -2.3
CAPN1P07384 RNA5SP255-201ENST00000516370 107 ntBASIC0.7□□□□□ -2.3
CAPN1P07384 RNU6-966P-201ENST00000516479 104 ntBASIC0.7□□□□□ -2.3
CAPN1P07384 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
CAPN1P07384 RNU6-845P-201ENST00000362578 103 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 Y_RNA.166-201ENST00000363730 102 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 Y_RNA.279-201ENST00000364763 95 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 Y_RNA.466-201ENST00000384294 113 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-342P-201ENST00000384521 104 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-310P-201ENST00000384655 107 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 MIR516B2-201ENST00000385190 85 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 SNORA69.1-201ENST00000390904 137 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-1156P-201ENST00000410365 100 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-370P-201ENST00000411008 104 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-1304P-201ENST00000411374 106 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.69□□□□□ -2.3
CAPN1P07384 RNU6-1132P-201ENST00000459214 107 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.69□□□□□ -2.3
CAPN1P07384 MIR4762-201ENST00000585261 75 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 AC240442.1-201ENST00000616055 283 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 AC098679.4-201ENST00000624241 654 ntBASIC0.69□□□□□ -2.3
CAPN1P07384 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.69□□□□□ -2.3
CAPN1P07384 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CAPN1P07384 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CAPN1P07384 Y_RNA.160-201ENST00000363677 92 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 RNU6-1188P-201ENST00000363795 107 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 RNY3P11-201ENST00000364153 102 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 MIR625-201ENST00000385047 85 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 MIR605-201ENST00000385078 83 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 MIR613-201ENST00000385248 95 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 SNORA75.6-201ENST00000391318 127 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 RNU2-54P-201ENST00000410299 190 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 RNU6-1199P-201ENST00000411249 104 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 Y_RNA.635-201ENST00000459041 101 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
CAPN1P07384 RNA5SP264-201ENST00000363115 107 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 Y_RNA.253-201ENST00000364562 112 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 RNU6-890P-201ENST00000384121 107 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 RNU2-61P-201ENST00000411069 191 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AC067940.1-201ENST00000458411 300 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AC025627.3-201ENST00000582078 182 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AC006380.1-201ENST00000603598 186 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 AC011476.5-201ENST00000615594 130 ntBASIC0.67□□□□□ -2.3
CAPN1P07384 MIR103A2-201ENST00000362154 78 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 SNORA25.3-201ENST00000363205 127 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNY3P4-201ENST00000384428 101 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 MIR508-201ENST00000384857 115 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 MIR15B-201ENST00000385045 98 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 MIR522-201ENST00000385071 87 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 Y_RNA.599-201ENST00000410489 109 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 FCF1P4-201ENST00000448326 183 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNU7-169P-201ENST00000459456 61 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNU7-41P-201ENST00000515917 61 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNU6-1012P-201ENST00000516606 109 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNA5SP480-201ENST00000516840 109 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 SNORA74.3-201ENST00000517108 154 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 TPTEP1-208ENST00000636884 213 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CAPN1P07384 AC068700.1-201ENST00000565862 3754 ntBASIC0.66□□□□□ -2.3
CAPN1P07384 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 SNORD81.2-201ENST00000365153 76 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6-20P-201ENST00000384106 107 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 MIR520C-201ENST00000385005 87 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 MIR136-201ENST00000385207 82 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 MIR1185-1-201ENST00000408598 86 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 MRPS18CP6-201ENST00000423587 223 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 CHEK2P4-201ENST00000450340 246 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6-436P-201ENST00000516171 114 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6-264P-201ENST00000517134 104 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.65□□□□□ -2.31
CAPN1P07384 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 AL512605.2-201ENST00000592972 256 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 AC005176.2-201ENST00000596933 147 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 AL442644.1-201ENST00000454390 3105 ntBASIC0.65□□□□□ -2.31
CAPN1P07384 RNU6-626P-201ENST00000363354 107 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AC117470.1-201ENST00000381974 330 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 Y_RNA.446-201ENST00000384178 104 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 RNU6-1297P-201ENST00000384415 104 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 SNORD78.2-201ENST00000391076 69 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.64□□□□□ -2.31
CAPN1P07384 AL390729.2-201ENST00000416137 156 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 MLLT10P1-201ENST00000418346 262 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.64□□□□□ -2.31
CAPN1P07384 MTCO3P10-201ENST00000455912 772 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 RNU6-155P-201ENST00000516347 100 ntBASIC0.64□□□□□ -2.31
CAPN1P07384 RNU7-4P-201ENST00000516961 62 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms