Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.67□□□□□ -2.3
CD74P04233 AC098614.3-201ENST00000438957 440 ntBASIC0.67□□□□□ -2.3
CD74P04233 RPS20P10-201ENST00000451209 253 ntBASIC0.67□□□□□ -2.3
CD74P04233 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.67□□□□□ -2.3
CD74P04233 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.67□□□□□ -2.3
CD74P04233 SNORD111.1-201ENST00000516421 86 ntBASIC0.67□□□□□ -2.3
CD74P04233 RNU6-966P-201ENST00000516479 104 ntBASIC0.67□□□□□ -2.3
CD74P04233 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
CD74P04233 AL355073.2-201ENST00000612106 557 ntBASIC0.67□□□□□ -2.3
CD74P04233 U2.1-201ENST00000618978 145 ntBASIC0.67□□□□□ -2.3
CD74P04233 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.67□□□□□ -2.3
CD74P04233 AC008163.1-202ENST00000636004 2889 ntBASIC0.67□□□□□ -2.3
CD74P04233 SNORD114-7-201ENST00000362520 77 ntBASIC0.66□□□□□ -2.3
CD74P04233 Y_RNA.259-201ENST00000364619 101 ntBASIC0.66□□□□□ -2.3
CD74P04233 Y_RNA.361-201ENST00000365515 120 ntBASIC0.66□□□□□ -2.3
CD74P04233 Y_RNA.446-201ENST00000384178 104 ntBASIC0.66□□□□□ -2.3
CD74P04233 RNU6-1297P-201ENST00000384415 104 ntBASIC0.66□□□□□ -2.3
CD74P04233 RNY3P4-201ENST00000384428 101 ntBASIC0.66□□□□□ -2.3
CD74P04233 RNU6-1105P-201ENST00000384774 107 ntBASIC0.66□□□□□ -2.3
CD74P04233 MIR1298-201ENST00000408783 112 ntBASIC0.66□□□□□ -2.3
CD74P04233 AL390729.2-201ENST00000416137 156 ntBASIC0.66□□□□□ -2.3
CD74P04233 AC093019.1-201ENST00000443135 252 ntBASIC0.66□□□□□ -2.3
CD74P04233 RNU6-699P-201ENST00000517081 110 ntBASIC0.66□□□□□ -2.3
CD74P04233 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.66□□□□□ -2.3
CD74P04233 AC133104.2-201ENST00000615272 193 ntBASIC0.66□□□□□ -2.3
CD74P04233 RNU6-1084P-201ENST00000362498 107 ntBASIC0.65□□□□□ -2.31
CD74P04233 SNORA80D-201ENST00000384488 135 ntBASIC0.65□□□□□ -2.31
CD74P04233 RNU6-1199P-201ENST00000411249 104 ntBASIC0.65□□□□□ -2.31
CD74P04233 AC138393.2-201ENST00000414742 246 ntBASIC0.65□□□□□ -2.31
CD74P04233 CHEK2P4-201ENST00000450340 246 ntBASIC0.65□□□□□ -2.31
CD74P04233 RPS26P48-201ENST00000491713 339 ntBASIC0.65□□□□□ -2.31
CD74P04233 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
CD74P04233 SNORA25.10-201ENST00000515926 124 ntBASIC0.65□□□□□ -2.31
CD74P04233 RNU6-436P-201ENST00000516171 114 ntBASIC0.65□□□□□ -2.31
CD74P04233 RNU6-1012P-201ENST00000516606 109 ntBASIC0.65□□□□□ -2.31
CD74P04233 MIR3192-201ENST00000584920 77 ntBASIC0.65□□□□□ -2.31
CD74P04233 AC004832.4-201ENST00000608952 331 ntBASIC0.65□□□□□ -2.31
CD74P04233 AC106800.4-201ENST00000614905 153 ntBASIC0.65□□□□□ -2.31
CD74P04233 AC027279.3-201ENST00000625055 122 ntBASIC0.65□□□□□ -2.31
CD74P04233 Y_RNA.142-201ENST00000363491 102 ntBASIC0.64□□□□□ -2.31
CD74P04233 RNY1-201ENST00000364228 113 ntBASIC0.64□□□□□ -2.31
CD74P04233 Y_RNA.253-201ENST00000364562 112 ntBASIC0.64□□□□□ -2.31
CD74P04233 Y_RNA.329-201ENST00000365209 107 ntBASIC0.64□□□□□ -2.31
CD74P04233 Y_RNA.336-201ENST00000365307 109 ntBASIC0.64□□□□□ -2.31
CD74P04233 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
CD74P04233 Y_RNA.390-201ENST00000383932 102 ntBASIC0.64□□□□□ -2.31
CD74P04233 Y_RNA.540-201ENST00000384638 111 ntBASIC0.64□□□□□ -2.31
CD74P04233 MIR608-201ENST00000384820 100 ntBASIC0.64□□□□□ -2.31
CD74P04233 MIR559-201ENST00000385188 96 ntBASIC0.64□□□□□ -2.31
CD74P04233 SNORA75.2-201ENST00000391138 150 ntBASIC0.64□□□□□ -2.31
CD74P04233 SNORA75.3-201ENST00000391231 150 ntBASIC0.64□□□□□ -2.31
CD74P04233 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
CD74P04233 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.64□□□□□ -2.31
CD74P04233 RNU2-61P-201ENST00000411069 191 ntBASIC0.64□□□□□ -2.31
CD74P04233 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.64□□□□□ -2.31
CD74P04233 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.64□□□□□ -2.31
CD74P04233 SNORA20.3-201ENST00000516880 132 ntBASIC0.64□□□□□ -2.31
CD74P04233 AC006600.1-201ENST00000572529 153 ntBASIC0.64□□□□□ -2.31
CD74P04233 AC084781.2-201ENST00000615568 161 ntBASIC0.64□□□□□ -2.31
CD74P04233 AC138305.3-201ENST00000624988 240 ntBASIC0.64□□□□□ -2.31
CD74P04233 U6.92-201ENST00000636464 89 ntBASIC0.64□□□□□ -2.31
CD74P04233 AC099654.14-201ENST00000638599 341 ntBASIC0.64□□□□□ -2.31
CD74P04233 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
CD74P04233 RNU6-490P-201ENST00000362985 107 ntBASIC0.63□□□□□ -2.31
CD74P04233 SNORA25.3-201ENST00000363205 127 ntBASIC0.63□□□□□ -2.31
CD74P04233 Y_RNA.112-201ENST00000363250 102 ntBASIC0.63□□□□□ -2.31
CD74P04233 Y_RNA.330-201ENST00000365230 109 ntBASIC0.63□□□□□ -2.31
CD74P04233 Y_RNA.384-201ENST00000383909 102 ntBASIC0.63□□□□□ -2.31
CD74P04233 Y_RNA.387-201ENST00000383918 102 ntBASIC0.63□□□□□ -2.31
CD74P04233 SNORD116-29-201ENST00000384516 83 ntBASIC0.63□□□□□ -2.31
CD74P04233 MIR452-201ENST00000385020 85 ntBASIC0.63□□□□□ -2.31
CD74P04233 MIR942-201ENST00000401111 86 ntBASIC0.63□□□□□ -2.31
CD74P04233 AC099799.1-201ENST00000439809 192 ntBASIC0.63□□□□□ -2.31
CD74P04233 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.63□□□□□ -2.31
CD74P04233 snoU13.25-201ENST00000458945 104 ntBASIC0.63□□□□□ -2.31
CD74P04233 SNORA18.7-201ENST00000516910 131 ntBASIC0.63□□□□□ -2.31
CD74P04233 MIR3973-201ENST00000579824 107 ntBASIC0.63□□□□□ -2.31
CD74P04233 AC005730.3-201ENST00000583067 366 ntBASIC0.63□□□□□ -2.31
CD74P04233 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
CD74P04233 AC005972.2-201ENST00000604690 348 ntBASIC0.63□□□□□ -2.31
CD74P04233 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
CD74P04233 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.63□□□□□ -2.31
CD74P04233 MIR1302-1-201ENST00000637932 143 ntBASIC0.63□□□□□ -2.31
CD74P04233 Y_RNA.146-201ENST00000363549 102 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNU6-1175P-201ENST00000365200 107 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNY4P36-201ENST00000391116 96 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNU6-855P-201ENST00000410395 104 ntBASIC0.62□□□□□ -2.31
CD74P04233 MTND5P15-201ENST00000434246 349 ntBASIC0.62□□□□□ -2.31
CD74P04233 AC245047.8-201ENST00000456455 284 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNU7-21P-201ENST00000459430 62 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNU6-277P-201ENST00000516272 106 ntBASIC0.62□□□□□ -2.31
CD74P04233 SNORD45.4-201ENST00000516629 73 ntBASIC0.62□□□□□ -2.31
CD74P04233 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
CD74P04233 PRELID3BP2-201ENST00000605362 201 ntBASIC0.62□□□□□ -2.31
CD74P04233 AL391903.3-201ENST00000612158 163 ntBASIC0.62□□□□□ -2.31
CD74P04233 AC025253.1-201ENST00000613623 543 ntBASIC0.62□□□□□ -2.31
CD74P04233 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
CD74P04233 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
CD74P04233 U8.5-201ENST00000364528 136 ntBASIC0.61□□□□□ -2.31
CD74P04233 RNU6-1040P-201ENST00000383974 107 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms