Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AC022441.3-201ENST00000605737 136 ntBASIC1.05□□□□□ -2.24
MMP1P03956 AC006157.1-201ENST00000611750 366 ntBASIC1.05□□□□□ -2.24
MMP1P03956 AL021879.1-201ENST00000611756 288 ntBASIC1.05□□□□□ -2.24
MMP1P03956 7SK.8-201ENST00000612110 250 ntBASIC1.05□□□□□ -2.24
MMP1P03956 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.05□□□□□ -2.24
MMP1P03956 7SK.11-201ENST00000615477 250 ntBASIC1.05□□□□□ -2.24
MMP1P03956 7SK.13-201ENST00000622040 250 ntBASIC1.05□□□□□ -2.24
MMP1P03956 AC127459.3-201ENST00000624328 466 ntBASIC1.05□□□□□ -2.24
MMP1P03956 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
MMP1P03956 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
MMP1P03956 Y_RNA.61-201ENST00000362835 102 ntBASIC1.04□□□□□ -2.24
MMP1P03956 Y_RNA.813-201ENST00000364639 102 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RNU6-474P-201ENST00000384243 107 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RNU6-505P-201ENST00000384427 107 ntBASIC1.04□□□□□ -2.24
MMP1P03956 Y_RNA.570-201ENST00000384750 101 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RN7SKP200-201ENST00000410564 320 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RNU6-130P-201ENST00000411112 103 ntBASIC1.04□□□□□ -2.24
MMP1P03956 MCFD2P1-201ENST00000417812 300 ntBASIC1.04□□□□□ -2.24
MMP1P03956 MRPL35P3-201ENST00000421557 364 ntBASIC1.04□□□□□ -2.24
MMP1P03956 MTND1P14-201ENST00000427400 950 ntBASIC1.04□□□□□ -2.24
MMP1P03956 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.04□□□□□ -2.24
MMP1P03956 PGBD4P5-201ENST00000445958 426 ntBASIC1.04□□□□□ -2.24
MMP1P03956 MTND4P19-201ENST00000446659 478 ntBASIC1.04□□□□□ -2.24
MMP1P03956 SUMO1P2-201ENST00000452524 304 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RNU7-94P-201ENST00000459576 63 ntBASIC1.04□□□□□ -2.24
MMP1P03956 AL133373.1-201ENST00000497098 94 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RNU6-436P-201ENST00000516171 114 ntBASIC1.04□□□□□ -2.24
MMP1P03956 SUMO2P16-201ENST00000519475 264 ntBASIC1.04□□□□□ -2.24
MMP1P03956 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
MMP1P03956 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.04□□□□□ -2.24
MMP1P03956 PART1_1.1-201ENST00000611761 217 ntBASIC1.04□□□□□ -2.24
MMP1P03956 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
MMP1P03956 SNORA1B-201ENST00000362535 133 ntBASIC1.03□□□□□ -2.24
MMP1P03956 SNORD81.1-201ENST00000363064 77 ntBASIC1.03□□□□□ -2.24
MMP1P03956 SNORD116-13-201ENST00000384408 92 ntBASIC1.03□□□□□ -2.24
MMP1P03956 Y_RNA.535-201ENST00000384612 99 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU6-136P-201ENST00000384663 107 ntBASIC1.03□□□□□ -2.24
MMP1P03956 Y_RNA.645-201ENST00000391229 102 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNA5SP511-201ENST00000410487 115 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU2-61P-201ENST00000411069 191 ntBASIC1.03□□□□□ -2.24
MMP1P03956 AC022028.1-201ENST00000412054 408 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RPEP5-201ENST00000441137 268 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RPL39P38-201ENST00000467018 153 ntBASIC1.03□□□□□ -2.24
MMP1P03956 AC010655.3-201ENST00000478818 450 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU6-1170P-201ENST00000515974 106 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU6-1337P-201ENST00000516525 95 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU6-1291P-201ENST00000516591 104 ntBASIC1.03□□□□□ -2.24
MMP1P03956 RNU6-341P-201ENST00000516973 96 ntBASIC1.03□□□□□ -2.24
MMP1P03956 AL160413.1-201ENST00000622780 310 ntBASIC1.03□□□□□ -2.24
MMP1P03956 Y_RNA.138-201ENST00000363462 102 ntBASIC1.02□□□□□ -2.25
MMP1P03956 Y_RNA.148-201ENST00000363557 117 ntBASIC1.02□□□□□ -2.25
MMP1P03956 Y_RNA.230-201ENST00000364348 109 ntBASIC1.02□□□□□ -2.25
MMP1P03956 RNU6-1175P-201ENST00000365200 107 ntBASIC1.02□□□□□ -2.25
MMP1P03956 RNU6-376P-201ENST00000384731 106 ntBASIC1.02□□□□□ -2.25
MMP1P03956 MIR1302-11-201ENST00000408051 138 ntBASIC1.02□□□□□ -2.25
MMP1P03956 MIR1302-9-201ENST00000408365 138 ntBASIC1.02□□□□□ -2.25
MMP1P03956 MIR1302-10-201ENST00000408734 138 ntBASIC1.02□□□□□ -2.25
MMP1P03956 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.02□□□□□ -2.25
MMP1P03956 STAG3L5P-204ENST00000443759 179 ntBASIC1.02□□□□□ -2.25
MMP1P03956 OR9P1P-201ENST00000496431 281 ntBASIC1.02□□□□□ -2.25
MMP1P03956 RNU6-1278P-201ENST00000516130 107 ntBASIC1.02□□□□□ -2.25
MMP1P03956 RNU6-155P-201ENST00000516347 100 ntBASIC1.02□□□□□ -2.25
MMP1P03956 RN7SKP295-201ENST00000517264 153 ntBASIC1.02□□□□□ -2.25
MMP1P03956 AL121655.1-201ENST00000605811 308 ntBASIC1.02□□□□□ -2.25
MMP1P03956 AL020996.3-201ENST00000606617 222 ntBASIC1.02□□□□□ -2.25
MMP1P03956 MIR1302-2-201ENST00000607096 138 ntBASIC1.02□□□□□ -2.25
MMP1P03956 Y_RNA.267-201ENST00000364679 109 ntBASIC1.01□□□□□ -2.25
MMP1P03956 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
MMP1P03956 Y_RNA.431-201ENST00000384086 102 ntBASIC1.01□□□□□ -2.25
MMP1P03956 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AL354751.2-201ENST00000415471 210 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AL162725.1-201ENST00000435405 301 ntBASIC1.01□□□□□ -2.25
MMP1P03956 HSPE1P13-201ENST00000451143 297 ntBASIC1.01□□□□□ -2.25
MMP1P03956 RNU6-1132P-201ENST00000459214 107 ntBASIC1.01□□□□□ -2.25
MMP1P03956 RNU6-475P-201ENST00000516073 104 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AC040926.1-201ENST00000530195 238 ntBASIC1.01□□□□□ -2.25
MMP1P03956 RPL21P9-201ENST00000556149 474 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AC006380.1-201ENST00000603598 186 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AL138825.1-201ENST00000618587 192 ntBASIC1.01□□□□□ -2.25
MMP1P03956 AC090971.5-201ENST00000621102 293 ntBASIC1.01□□□□□ -2.25
MMP1P03956 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
MMP1P03956 AC005592.1-201ENST00000566527 1640 ntBASIC1□□□□□ -2.25
MMP1P03956 MIRLET7C-201ENST00000362160 84 ntBASIC1□□□□□ -2.25
MMP1P03956 Y_RNA.329-201ENST00000365209 107 ntBASIC1□□□□□ -2.25
MMP1P03956 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
MMP1P03956 Y_RNA.462-201ENST00000384268 102 ntBASIC1□□□□□ -2.25
MMP1P03956 MIR216A-201ENST00000385063 110 ntBASIC1□□□□□ -2.25
MMP1P03956 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
MMP1P03956 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
MMP1P03956 CALM2P4-201ENST00000430810 426 ntBASIC1□□□□□ -2.25
MMP1P03956 Z98949.2-201ENST00000440996 144 ntBASIC1□□□□□ -2.25
MMP1P03956 SNORA25.10-201ENST00000515926 124 ntBASIC1□□□□□ -2.25
MMP1P03956 RNA5SP168-201ENST00000516642 112 ntBASIC1□□□□□ -2.25
MMP1P03956 RNU6-1096P-201ENST00000517089 102 ntBASIC1□□□□□ -2.25
MMP1P03956 RNA5SP404-201ENST00000517118 132 ntBASIC1□□□□□ -2.25
MMP1P03956 AC104695.3-201ENST00000604052 296 ntBASIC1□□□□□ -2.25
MMP1P03956 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
MMP1P03956 AC004832.4-201ENST00000608952 331 ntBASIC1□□□□□ -2.25
MMP1P03956 AC073349.3-201ENST00000617616 186 ntBASIC1□□□□□ -2.25
MMP1P03956 AL513423.1-201ENST00000621695 132 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms