Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC244015.1-201ENST00000622301 99 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 Y_RNA.136-201ENST00000363444 102 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RNU6-1080P-201ENST00000383982 107 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RNU6-1065P-201ENST00000384513 106 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 Y_RNA.569-201ENST00000384749 103 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 SNORA67.5-201ENST00000391036 107 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 MTND2P23-201ENST00000422990 651 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RPS27P16-201ENST00000425758 201 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AL358176.2-201ENST00000425769 204 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 Z98949.2-201ENST00000440996 144 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RNU7-34P-201ENST00000459394 64 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RNU6-327P-201ENST00000516270 127 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 RNU6-570P-201ENST00000517051 105 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AC019176.1-201ENST00000518519 225 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.29□□□□□ -2.2
MT-ND1P03886 AL117187.1-201ENST00000555482 181 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AC136443.5-201ENST00000603741 370 ntBASIC1.29□□□□□ -2.2
MT-ND1P03886 AC068700.1-201ENST00000565862 3754 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 U8.7-201ENST00000364940 136 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RNU6-290P-201ENST00000365212 101 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 Y_RNA.376-201ENST00000365638 108 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 Y_RNA.456-201ENST00000384232 111 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 Y_RNA.459-201ENST00000384251 102 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 MT-TW-201ENST00000387382 68 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 SNORA26.5-201ENST00000391215 123 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RNU6-710P-201ENST00000410424 105 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RN7SKP200-201ENST00000410564 320 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RNU6-1203P-201ENST00000410703 110 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 STAG3L5P-204ENST00000443759 179 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RN7SL429P-201ENST00000479090 223 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RN7SL489P-201ENST00000486185 223 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RN7SL327P-201ENST00000488659 223 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 OR9P1P-201ENST00000496431 281 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RNU6-1143P-201ENST00000516125 104 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 AC011604.1-201ENST00000545978 196 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 AC008269.2-201ENST00000561915 1105 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 AC005972.2-201ENST00000604690 348 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.28□□□□□ -2.2
MT-ND1P03886 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 RN7SL853P-201ENST00000617250 223 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 AC068647.2-201ENST00000637380 353 ntBASIC1.28□□□□□ -2.2
MT-ND1P03886 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MT-ND1P03886 Y_RNA.162-201ENST00000363683 102 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 RNU4-41P-201ENST00000364426 143 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 RNU6-1105P-201ENST00000384774 107 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 MIR520G-201ENST00000385064 90 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 AC004965.1-201ENST00000413033 213 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
MT-ND1P03886 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.27□□□□□ -2.21
MT-ND1P03886 RPS29P29-201ENST00000456396 171 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 AC136628.3-201ENST00000521868 290 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 AL645939.4-201ENST00000604495 135 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 AP001282.2-201ENST00000616149 309 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.27□□□□□ -2.21
MT-ND1P03886 AC134026.1-201ENST00000623249 2239 ntBASIC1.27□□□□□ -2.21
MT-ND1P03886 MIRLET7C-201ENST00000362160 84 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 MIR26B-201ENST00000362251 77 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 Y_RNA.133-201ENST00000363428 110 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 Y_RNA.265-201ENST00000364677 108 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RNU6-472P-201ENST00000384299 107 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RNU6-950P-201ENST00000384651 107 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 Y_RNA.574-201ENST00000384766 95 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 MIR568-201ENST00000385036 95 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 CALM2P4-201ENST00000430810 426 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.26□□□□□ -2.21
MT-ND1P03886 AC104332.1-201ENST00000440471 797 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AL049830.1-201ENST00000468034 425 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AC117454.1-201ENST00000491120 168 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RNU6-1338P-201ENST00000516328 91 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 RNU2-56P-201ENST00000516826 190 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AC090821.2-201ENST00000523552 176 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.26□□□□□ -2.21
MT-ND1P03886 AP002004.2-201ENST00000531656 154 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AC024405.2-202ENST00000532731 184 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 AL160236.1-201ENST00000556317 195 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
MT-ND1P03886 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 MIR8062-201ENST00000621515 85 ntBASIC1.26□□□□□ -2.21
MT-ND1P03886 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
MT-ND1P03886 Y_RNA.47-201ENST00000362697 108 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU6-1309P-201ENST00000363305 108 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU6-326P-201ENST00000365480 107 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU6-1323P-201ENST00000384025 107 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 SNORA72.4-201ENST00000384174 132 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 Y_RNA.483-201ENST00000384380 101 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 U8.16-201ENST00000391279 133 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 U8.19-201ENST00000459095 133 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU7-141P-201ENST00000459304 62 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 Y_RNA.637-201ENST00000459424 114 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU7-115P-201ENST00000516433 55 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNA5SP168-201ENST00000516642 112 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU2-31P-201ENST00000516954 155 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 SCARNA24.2-201ENST00000516968 130 ntBASIC1.25□□□□□ -2.21
MT-ND1P03886 RNU6-548P-201ENST00000517083 115 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 296.1 ms