Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RNU6-1116P-201ENST00000517269 99 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AL358944.1-201ENST00000528537 144 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AP002004.2-201ENST00000531656 154 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 MIR4790-201ENST00000577799 79 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.41□□□□□ -2.34
COL4A1P02462 AC080078.2-201ENST00000603766 501 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AC242852.1-201ENST00000612151 96 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 AC244015.1-201ENST00000622301 99 ntBASIC0.41□□□□□ -2.34
COL4A1P02462 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
COL4A1P02462 Y_RNA.6-201ENST00000362350 114 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 SNORD68-201ENST00000363214 84 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 RNU6-324P-201ENST00000363957 106 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 Y_RNA.577-201ENST00000384794 101 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 MIR1298-201ENST00000408783 112 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 RNU5A-5P-201ENST00000411054 116 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 MLLT10P1-201ENST00000418346 262 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 CALM2P4-201ENST00000430810 426 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 SNORD124-201ENST00000459577 104 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 RNU6-264P-201ENST00000517134 104 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.4□□□□□ -2.34
COL4A1P02462 MIR4778-201ENST00000577635 80 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.4□□□□□ -2.34
COL4A1P02462 MIR5690-201ENST00000583739 73 ntBASIC0.4□□□□□ -2.34
COL4A1P02462 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.4□□□□□ -2.34
COL4A1P02462 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
COL4A1P02462 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-117P-201ENST00000365415 107 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-163P-201ENST00000384396 106 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR200A-201ENST00000384875 90 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR136-201ENST00000385207 82 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-192P-201ENST00000391253 100 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR1277-201ENST00000408536 78 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU4-14P-201ENST00000410858 122 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-1001P-201ENST00000411265 100 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.4□□□□□ -2.35
COL4A1P02462 AC244023.1-201ENST00000426884 112 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC107399.1-201ENST00000451226 265 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 snoU13.19-201ENST00000459148 104 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-625P-201ENST00000459412 107 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 SNORA25.10-201ENST00000515926 124 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-758P-201ENST00000516292 89 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-1337P-201ENST00000516525 95 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 Y_RNA.708-201ENST00000516950 96 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC109810.1-201ENST00000534066 224 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR5701-3-201ENST00000578890 82 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR3684-201ENST00000579779 74 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR5701-1-201ENST00000585138 82 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC242498.1-201ENST00000604134 111 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR1244-1-201ENST00000612829 85 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR5701-2-201ENST00000615634 82 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC240442.1-201ENST00000616055 283 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC073349.3-201ENST00000617616 186 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 AC243994.1-201ENST00000618627 109 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR1244-3-201ENST00000635744 85 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR1244-2-201ENST00000636449 85 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR3674-201ENST00000636576 68 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 MIR1244-4-202ENST00000636813 85 ntBASIC0.4□□□□□ -2.35
COL4A1P02462 RNU6-874P-201ENST00000362390 105 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 Y_RNA.450-201ENST00000384198 113 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 RNU6-601P-201ENST00000384540 107 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 MIR520C-201ENST00000385005 87 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 MIR520G-201ENST00000385064 90 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 MT-TL1-201ENST00000386347 75 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 RNU6-1199P-201ENST00000411249 104 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC006461.1-201ENST00000412637 326 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC063976.4-201ENST00000421971 163 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
COL4A1P02462 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.39□□□□□ -2.35
COL4A1P02462 AC093019.1-201ENST00000443135 252 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AL137792.2-201ENST00000443484 235 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 UQCRBP2-201ENST00000447827 297 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.39□□□□□ -2.35
COL4A1P02462 RNU7-169P-201ENST00000459456 61 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.39□□□□□ -2.35
COL4A1P02462 AC116353.2-201ENST00000505332 712 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC022493.2-201ENST00000506122 481 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC018710.1-201ENST00000506509 158 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 SNORA40.9-201ENST00000515895 93 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 RNU6-470P-201ENST00000515954 104 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 RNU2-56P-201ENST00000516826 190 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC144568.1-201ENST00000520139 137 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 MIR548AR-201ENST00000582191 57 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 AC005972.2-201ENST00000604690 348 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 MIR6079-201ENST00000635807 62 ntBASIC0.39□□□□□ -2.35
COL4A1P02462 Y_RNA.86-201ENST00000363020 111 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 Y_RNA.101-201ENST00000363154 102 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 Y_RNA.148-201ENST00000363557 117 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 RNU2-64P-201ENST00000411315 191 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 MTND4P28-201ENST00000426217 387 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.38□□□□□ -2.35
COL4A1P02462 MRPS10P1-201ENST00000448483 130 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
COL4A1P02462 RNU6-120P-201ENST00000516077 103 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 RNU6-911P-201ENST00000516523 104 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 AC090142.3-201ENST00000519012 385 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.38□□□□□ -2.35
COL4A1P02462 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.38□□□□□ -2.35
COL4A1P02462 MIR4762-201ENST00000585261 75 ntBASIC0.38□□□□□ -2.35
COL4A1P02462 AC005014.2-201ENST00000607795 599 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms