Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.89□□□□□ -2.55
TNFP01375 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.9□□□□□ -2.55
TNFP01375 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.9□□□□□ -2.55
TNFP01375 SNORD115-7-201ENST00000365306 82 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RNU6-609P-201ENST00000365459 107 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RNU6-376P-201ENST00000384731 106 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR215-201ENST00000384858 110 ntBASIC-0.9□□□□□ -2.55
TNFP01375 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR1257-201ENST00000408490 117 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RNU6-387P-201ENST00000411331 105 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MTCO3P38-201ENST00000468910 766 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RPL7P42-201ENST00000481005 679 ntBASIC-0.9□□□□□ -2.55
TNFP01375 SNORD22.1-201ENST00000516331 125 ntBASIC-0.9□□□□□ -2.55
TNFP01375 SNORA25.13-201ENST00000516395 103 ntBASIC-0.9□□□□□ -2.55
TNFP01375 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.9□□□□□ -2.55
TNFP01375 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.9□□□□□ -2.55
TNFP01375 MTND5P34-201ENST00000568888 325 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR3179-1-201ENST00000578940 84 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR3179-2-201ENST00000579107 84 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR3179-3-201ENST00000579566 84 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR5704-201ENST00000584029 77 ntBASIC-0.9□□□□□ -2.55
TNFP01375 MIR3179-4-201ENST00000617599 84 ntBASIC-0.9□□□□□ -2.55
TNFP01375 AC006927.2-201ENST00000639256 389 ntBASIC-0.9□□□□□ -2.55
TNFP01375 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.91□□□□□ -2.56
TNFP01375 MIR539-201ENST00000365690 78 ntBASIC-0.91□□□□□ -2.56
TNFP01375 RNU6-641P-201ENST00000384006 107 ntBASIC-0.91□□□□□ -2.56
TNFP01375 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.91□□□□□ -2.56
TNFP01375 SNORA20B-201ENST00000384220 132 ntBASIC-0.91□□□□□ -2.56
TNFP01375 SNORA49-201ENST00000386157 136 ntBASIC-0.91□□□□□ -2.56
TNFP01375 Y_RNA.578-201ENST00000390903 88 ntBASIC-0.91□□□□□ -2.56
TNFP01375 RNU6-550P-201ENST00000391057 101 ntBASIC-0.91□□□□□ -2.56
TNFP01375 MTND2P9-201ENST00000422293 931 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AC018865.2-201ENST00000423631 129 ntBASIC-0.91□□□□□ -2.56
TNFP01375 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.91□□□□□ -2.56
TNFP01375 AL358934.1-201ENST00000432346 324 ntBASIC-0.91□□□□□ -2.56
TNFP01375 MTND4P18-201ENST00000447010 465 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AC244505.6-201ENST00000452829 130 ntBASIC-0.91□□□□□ -2.56
TNFP01375 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.91□□□□□ -2.56
TNFP01375 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.91□□□□□ -2.56
TNFP01375 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC-0.91□□□□□ -2.56
TNFP01375 AC116353.2-201ENST00000505332 712 ntBASIC-0.91□□□□□ -2.56
TNFP01375 RNU6-475P-201ENST00000516073 104 ntBASIC-0.91□□□□□ -2.56
TNFP01375 SNORD45.4-201ENST00000516629 73 ntBASIC-0.91□□□□□ -2.56
TNFP01375 SNORA27.4-201ENST00000516650 95 ntBASIC-0.91□□□□□ -2.56
TNFP01375 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.91□□□□□ -2.56
TNFP01375 RNU7-161P-201ENST00000517289 62 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AP000811.1-201ENST00000603803 651 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AL158050.2-201ENST00000605336 568 ntBASIC-0.91□□□□□ -2.56
TNFP01375 MIR6129-201ENST00000616087 109 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AC010205.1-201ENST00000616668 449 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AC009159.2-201ENST00000617603 606 ntBASIC-0.91□□□□□ -2.56
TNFP01375 AC137590.2-201ENST00000619709 240 ntBASIC-0.91□□□□□ -2.56
TNFP01375 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.92□□□□□ -2.56
TNFP01375 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.92□□□□□ -2.56
TNFP01375 Y_RNA.588-201ENST00000391254 102 ntBASIC-0.92□□□□□ -2.56
TNFP01375 RNA5SP261-201ENST00000410536 106 ntBASIC-0.92□□□□□ -2.56
TNFP01375 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.92□□□□□ -2.56
TNFP01375 RNA5SP484-201ENST00000458857 111 ntBASIC-0.92□□□□□ -2.56
TNFP01375 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.92□□□□□ -2.56
TNFP01375 AC021146.6-201ENST00000514659 117 ntBASIC-0.92□□□□□ -2.56
TNFP01375 RNA5SP180-201ENST00000516181 101 ntBASIC-0.92□□□□□ -2.56
TNFP01375 RNU6-334P-201ENST00000517072 102 ntBASIC-0.92□□□□□ -2.56
TNFP01375 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.92□□□□□ -2.56
TNFP01375 AP003733.2-201ENST00000529409 171 ntBASIC-0.92□□□□□ -2.56
TNFP01375 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-0.92□□□□□ -2.56
TNFP01375 BNIP3P39-201ENST00000601077 554 ntBASIC-0.92□□□□□ -2.56
TNFP01375 AC002044.1-201ENST00000606707 158 ntBASIC-0.92□□□□□ -2.56
TNFP01375 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.93□□□□□ -2.56
TNFP01375 SNORA63.5-201ENST00000363548 123 ntBASIC-0.93□□□□□ -2.56
TNFP01375 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.93□□□□□ -2.56
TNFP01375 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.93□□□□□ -2.56
TNFP01375 SNORA51.10-201ENST00000384418 136 ntBASIC-0.93□□□□□ -2.56
TNFP01375 RNU6-905P-201ENST00000384434 107 ntBASIC-0.93□□□□□ -2.56
TNFP01375 MIR204-201ENST00000385200 110 ntBASIC-0.93□□□□□ -2.56
TNFP01375 MTND4P3-201ENST00000417829 541 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AL137792.2-201ENST00000443484 235 ntBASIC-0.93□□□□□ -2.56
TNFP01375 snoU13.13-201ENST00000458842 104 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AC107027.2-201ENST00000512197 115 ntBASIC-0.93□□□□□ -2.56
TNFP01375 RNU2-13P-201ENST00000515909 113 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.93□□□□□ -2.56
TNFP01375 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-0.93□□□□□ -2.56
TNFP01375 MIR548AE1-201ENST00000583292 70 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AC008507.2-201ENST00000588402 1176 ntBASIC-0.93□□□□□ -2.56
TNFP01375 TUSC7.1-201ENST00000610969 165 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AL354950.2-201ENST00000617939 290 ntBASIC-0.93□□□□□ -2.56
TNFP01375 AC023510.2-201ENST00000622162 746 ntBASIC-0.93□□□□□ -2.56
TNFP01375 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.93□□□□□ -2.56
TNFP01375 AC013437.2-201ENST00000639587 677 ntBASIC-0.93□□□□□ -2.56
TNFP01375 RNU6-179P-201ENST00000363350 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 SNORD115-6-201ENST00000363942 82 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 SNORD115-35-201ENST00000365122 82 ntBASIC-0.94□□□□□ -2.56
TNFP01375 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-245P-201ENST00000384020 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-926P-201ENST00000384075 107 ntBASIC-0.94□□□□□ -2.56
TNFP01375 MIR522-201ENST00000385071 87 ntBASIC-0.94□□□□□ -2.56
TNFP01375 SNORA75.4-201ENST00000391278 119 ntBASIC-0.94□□□□□ -2.56
TNFP01375 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms