Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
LDLRP01130 ZNF702P-202ENST00000434269 1966 ntBASIC1.91□□□□□ -2.1
LDLRP01130 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
LDLRP01130 RNU6-704P-201ENST00000364162 103 ntBASIC1.91□□□□□ -2.1
LDLRP01130 Y_RNA.243-201ENST00000364481 109 ntBASIC1.91□□□□□ -2.1
LDLRP01130 RNU6-818P-201ENST00000364837 108 ntBASIC1.91□□□□□ -2.1
LDLRP01130 Y_RNA.571-201ENST00000384753 98 ntBASIC1.91□□□□□ -2.1
LDLRP01130 MIR613-201ENST00000385248 95 ntBASIC1.91□□□□□ -2.1
LDLRP01130 SNORA40.19-201ENST00000390846 128 ntBASIC1.91□□□□□ -2.1
LDLRP01130 SNORA26.5-201ENST00000391215 123 ntBASIC1.91□□□□□ -2.1
LDLRP01130 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
LDLRP01130 HMGN2P19-201ENST00000425149 265 ntBASIC1.91□□□□□ -2.1
LDLRP01130 TMSB4XP3-201ENST00000445144 114 ntBASIC1.91□□□□□ -2.1
LDLRP01130 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.91□□□□□ -2.1
LDLRP01130 RNA5SP445-201ENST00000515889 115 ntBASIC1.91□□□□□ -2.1
LDLRP01130 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.91□□□□□ -2.1
LDLRP01130 AC108706.1-201ENST00000611053 297 ntBASIC1.91□□□□□ -2.1
LDLRP01130 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.91□□□□□ -2.1
LDLRP01130 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
LDLRP01130 MIR337-201ENST00000362281 93 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U3.8-201ENST00000363675 217 ntBASIC1.9□□□□□ -2.11
LDLRP01130 Y_RNA.355-201ENST00000365462 98 ntBASIC1.9□□□□□ -2.11
LDLRP01130 SNORD50.2-201ENST00000365465 70 ntBASIC1.9□□□□□ -2.11
LDLRP01130 Y_RNA.361-201ENST00000365515 120 ntBASIC1.9□□□□□ -2.11
LDLRP01130 Y_RNA.580-201ENST00000391004 95 ntBASIC1.9□□□□□ -2.11
LDLRP01130 AL031003.1-201ENST00000404229 172 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNU2-2P-201ENST00000410396 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNU6-1041P-201ENST00000516254 102 ntBASIC1.9□□□□□ -2.11
LDLRP01130 AC100767.1-201ENST00000528178 123 ntBASIC1.9□□□□□ -2.11
LDLRP01130 MIR3169-201ENST00000578032 83 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNU2-4P-201ENST00000606190 192 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.15-201ENST00000611544 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.16-201ENST00000613119 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.12-201ENST00000613778 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.9-201ENST00000615427 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.11-201ENST00000616345 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.2-201ENST00000616535 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.3-201ENST00000617785 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.19-201ENST00000618602 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RNU2-1-201ENST00000618664 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.6-201ENST00000619225 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.5-201ENST00000619465 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 U2.10-201ENST00000620268 191 ntBASIC1.9□□□□□ -2.11
LDLRP01130 snoZ196.1-201ENST00000625269 89 ntBASIC1.9□□□□□ -2.11
LDLRP01130 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.9□□□□□ -2.11
LDLRP01130 RNU6-1048P-201ENST00000364054 107 ntBASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.796-201ENST00000364268 102 ntBASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.272-201ENST00000364696 102 ntBASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.291-201ENST00000364886 113 ntBASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.799-201ENST00000364992 102 ntBASIC1.89□□□□□ -2.11
LDLRP01130 RNU6-81P-201ENST00000365608 104 ntBASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.412-201ENST00000384001 104 ntBASIC1.89□□□□□ -2.11
LDLRP01130 RNU6-1235P-201ENST00000384559 107 ntBASIC1.89□□□□□ -2.11
LDLRP01130 AC019129.1-201ENST00000403786 261 ntBASIC1.89□□□□□ -2.11
LDLRP01130 AC060773.1-201ENST00000421698 310 ntBASIC1.89□□□□□ -2.11
LDLRP01130 RNU1-131P-201ENST00000458943 161 ntBASIC1.89□□□□□ -2.11
LDLRP01130 RNU6-498P-201ENST00000459468 107 ntBASIC1.89□□□□□ -2.11
LDLRP01130 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.89□□□□□ -2.11
LDLRP01130 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LDLRP01130 AC136628.3-201ENST00000521868 290 ntBASIC1.89□□□□□ -2.11
LDLRP01130 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
LDLRP01130 AC004832.4-201ENST00000608952 331 ntBASIC1.89□□□□□ -2.11
LDLRP01130 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
LDLRP01130 AL078604.3-201ENST00000615580 211 ntBASIC1.89□□□□□ -2.11
LDLRP01130 U6.115-201ENST00000636045 103 ntBASIC1.89□□□□□ -2.11
LDLRP01130 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LDLRP01130 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LDLRP01130 Y_RNA.7-201ENST00000362352 102 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNU6-324P-201ENST00000363957 106 ntBASIC1.88□□□□□ -2.11
LDLRP01130 snoU2_19.4-201ENST00000364329 80 ntBASIC1.88□□□□□ -2.11
LDLRP01130 Y_RNA.572-201ENST00000384757 98 ntBASIC1.88□□□□□ -2.11
LDLRP01130 SNORA17.3-201ENST00000391159 129 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNU6-381P-201ENST00000391259 108 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.88□□□□□ -2.11
LDLRP01130 MIR1185-2-201ENST00000408687 86 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNU6-321P-201ENST00000410912 106 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNA5SP450-201ENST00000411206 102 ntBASIC1.88□□□□□ -2.11
LDLRP01130 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
LDLRP01130 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.88□□□□□ -2.11
LDLRP01130 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.88□□□□□ -2.11
LDLRP01130 RNU2-34P-201ENST00000516534 121 ntBASIC1.88□□□□□ -2.11
LDLRP01130 RNU6-856P-201ENST00000516959 98 ntBASIC1.88□□□□□ -2.11
LDLRP01130 AC006380.1-201ENST00000603598 186 ntBASIC1.88□□□□□ -2.11
LDLRP01130 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.88□□□□□ -2.11
LDLRP01130 AC134026.1-201ENST00000623249 2239 ntBASIC1.88□□□□□ -2.11
LDLRP01130 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
LDLRP01130 MIR378A-201ENST00000362177 66 ntBASIC1.87□□□□□ -2.11
LDLRP01130 Y_RNA.75-201ENST00000362927 97 ntBASIC1.87□□□□□ -2.11
LDLRP01130 Y_RNA.172-201ENST00000363765 102 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RNU4-10P-201ENST00000364383 140 ntBASIC1.87□□□□□ -2.11
LDLRP01130 MIR499A-201ENST00000384903 122 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RNU6-1248P-201ENST00000391096 64 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RNA5SP465-201ENST00000391195 109 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RNU6-221P-201ENST00000459541 99 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RPL36AP21-201ENST00000490372 323 ntBASIC1.87□□□□□ -2.11
LDLRP01130 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms