Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-1278P-201ENST00000516130 107 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 RNU6-911P-201ENST00000516523 104 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 RNU6-1046P-201ENST00000516538 107 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 RNU6-1096P-201ENST00000517089 102 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AL512310.8-201ENST00000550183 120 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AL160236.1-201ENST00000556317 195 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 MIR3145-201ENST00000580727 82 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AL390123.1-201ENST00000603216 237 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 MIR8065-201ENST00000620577 100 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AC006435.5-201ENST00000624486 112 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 SNORD3E-202ENST00000627253 216 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AC005592.1-201ENST00000566527 1640 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 MIR410-201ENST00000362222 80 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 SNORA1B-201ENST00000362535 133 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU1-115P-201ENST00000365329 160 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 Y_RNA.389-201ENST00000383924 113 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 Y_RNA.439-201ENST00000384119 94 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 Y_RNA.535-201ENST00000384612 99 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AL034345.1-201ENST00000407768 123 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.27□□□□□ -2.21
PDGFBP01127 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.27□□□□□ -2.21
PDGFBP01127 PGBD4P5-201ENST00000445958 426 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU6-1132P-201ENST00000459214 107 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU6-436P-201ENST00000516171 114 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU6-1153P-201ENST00000516760 105 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 RNU6-1116P-201ENST00000517269 99 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.27□□□□□ -2.21
PDGFBP01127 MIR5000-201ENST00000577717 103 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AL360085.1-201ENST00000604713 532 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AC011373.1-201ENST00000607270 237 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 AL365434.2-201ENST00000607979 234 ntBASIC1.27□□□□□ -2.21
PDGFBP01127 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
PDGFBP01127 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.26□□□□□ -2.21
PDGFBP01127 RNU6-797P-201ENST00000363101 109 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 RNU6-939P-201ENST00000384634 107 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 RNU11-5P-201ENST00000391216 129 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 MLLT10P1-201ENST00000418346 262 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 PMCHL1-202ENST00000423102 261 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 CALM2P4-201ENST00000430810 426 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 AC005534.2-201ENST00000431047 433 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 U8.20-201ENST00000459445 131 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 SNORA40.14-201ENST00000516543 86 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 MIR3684-201ENST00000579779 74 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 DEFB117-201ENST00000602356 141 ntBASIC1.26□□□□□ -2.21
PDGFBP01127 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.26□□□□□ -2.21
PDGFBP01127 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PDGFBP01127 SNORD68-201ENST00000363214 84 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 Y_RNA.148-201ENST00000363557 117 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 SNORD42.2-201ENST00000365570 69 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 RNU6-21P-201ENST00000384710 107 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 MIR216A-201ENST00000385063 110 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 MIR618-201ENST00000385287 98 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 RNU6-855P-201ENST00000410395 104 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 Y_RNA.602-201ENST00000410535 92 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AL354751.2-201ENST00000415471 210 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AL049830.1-201ENST00000468034 425 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 SNORA25.10-201ENST00000515926 124 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 RNU6-113P-201ENST00000516653 101 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.25□□□□□ -2.21
PDGFBP01127 CYP3A52P-201ENST00000563326 91 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AL162424.1-201ENST00000602325 221 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AL121655.1-201ENST00000605811 308 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 PART1_1.1-201ENST00000611761 217 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 AL138825.1-201ENST00000618587 192 ntBASIC1.25□□□□□ -2.21
PDGFBP01127 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
PDGFBP01127 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
PDGFBP01127 SNORA22B-201ENST00000383876 138 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
PDGFBP01127 SNORA12.1-201ENST00000390873 148 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 RNU6-130P-201ENST00000411112 103 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.24□□□□□ -2.21
PDGFBP01127 Y_RNA.631-201ENST00000459607 101 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 AC010655.3-201ENST00000478818 450 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 SNORA70.12-201ENST00000516084 153 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 RNA5SP61-201ENST00000516453 100 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 RNA5SP168-201ENST00000516642 112 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 RN7SKP88-201ENST00000516847 250 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 RNU6-988P-201ENST00000519081 107 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 AC022441.3-201ENST00000605737 136 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 7SK.8-201ENST00000612110 250 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 7SK.11-201ENST00000615477 250 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 7SK.13-201ENST00000622040 250 ntBASIC1.24□□□□□ -2.21
PDGFBP01127 Y_RNA.28-201ENST00000362554 111 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RNU4-50P-201ENST00000364361 141 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.286-201ENST00000364813 102 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RNU6-117P-201ENST00000365415 107 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.395-201ENST00000383945 109 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.527-201ENST00000384573 102 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.570-201ENST00000384750 101 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 Y_RNA.645-201ENST00000391229 102 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 U8.16-201ENST00000391279 133 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 AL590004.1-201ENST00000405321 300 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 MIR1302-11-201ENST00000408051 138 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 MIR1302-9-201ENST00000408365 138 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 MIR1302-10-201ENST00000408734 138 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RNU6-101P-201ENST00000410323 104 ntBASIC1.23□□□□□ -2.21
PDGFBP01127 RNU5A-5P-201ENST00000411054 116 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms