Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 MCFD2P1-201ENST00000417812 300 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 Y_RNA.661-201ENST00000516003 99 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 SNORA31.4-201ENST00000516049 129 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 SNORA40.14-201ENST00000516543 86 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.23□□□□□ -2.21
GGPS1O95749 AL050343.2-201ENST00000607338 280 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 AL606534.2-204ENST00000635008 178 ntBASIC1.23□□□□□ -2.21
GGPS1O95749 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.5-201ENST00000362334 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.58-201ENST00000362807 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.122-201ENST00000363331 96 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.154-201ENST00000363624 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RNY3P1-201ENST00000365085 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.329-201ENST00000365209 107 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RNY3-201ENST00000365484 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.462-201ENST00000384268 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 MIR526A1-201ENST00000384897 85 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RNU6-710P-201ENST00000410424 105 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 AL390729.2-201ENST00000416137 156 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RPS20P10-201ENST00000451209 253 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 MTND3P22-201ENST00000510932 243 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 SNORD116-28-201ENST00000516123 91 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RNU7-40P-201ENST00000516397 64 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 RNA5SP404-201ENST00000517118 132 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 SNORA70.22-201ENST00000517160 124 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 AC005972.2-201ENST00000604690 348 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 AL121655.1-201ENST00000605811 308 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 Y_RNA.772-201ENST00000606692 102 ntBASIC1.22□□□□□ -2.21
GGPS1O95749 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GGPS1O95749 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
GGPS1O95749 RNU4-79P-201ENST00000362764 141 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 Y_RNA.118-201ENST00000363300 101 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 PIGPP3-201ENST00000425307 415 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 AL160004.2-201ENST00000432935 350 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.21□□□□□ -2.22
GGPS1O95749 AC245047.7-201ENST00000440265 293 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 RPL39P39-201ENST00000455840 151 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 AC048334.1-201ENST00000477975 159 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 SNORA25.10-201ENST00000515926 124 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 SNORA4-201ENST00000584302 138 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 RPS29P30-201ENST00000600975 111 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 MIR7111-201ENST00000619751 72 ntBASIC1.21□□□□□ -2.22
GGPS1O95749 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
GGPS1O95749 RNU1-124P-201ENST00000363861 145 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 Y_RNA.796-201ENST00000364268 102 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 Y_RNA.799-201ENST00000364992 102 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 Y_RNA.315-201ENST00000365117 102 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 MIR520E-201ENST00000384867 87 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 MIR222-201ENST00000384992 110 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 U8.19-201ENST00000459095 133 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 RPS23P4-201ENST00000487908 423 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 AC114811.1-201ENST00000507207 168 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 FAM106DP-201ENST00000586416 501 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 SNORD58B-201ENST00000607313 66 ntBASIC1.2□□□□□ -2.22
GGPS1O95749 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
GGPS1O95749 Y_RNA.253-201ENST00000364562 112 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 Y_RNA.336-201ENST00000365307 109 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 SNORA72-201ENST00000384339 132 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 RNY1P14-201ENST00000384426 108 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 Y_RNA.526-201ENST00000384572 110 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 MT-TD-201ENST00000387419 68 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 RNU6-910P-201ENST00000390844 107 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.19□□□□□ -2.22
GGPS1O95749 RNU6-947P-201ENST00000516264 106 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 Y_RNA.804-201ENST00000615262 101 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 AL008636.1-201ENST00000625038 1018 ntBASIC1.19□□□□□ -2.22
GGPS1O95749 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
GGPS1O95749 RNU4-73P-201ENST00000363164 141 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 Y_RNA.331-201ENST00000365267 102 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 RNU6-855P-201ENST00000410395 104 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
GGPS1O95749 LINC01399-202ENST00000458450 244 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 SNORD111.1-201ENST00000516421 86 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.18□□□□□ -2.22
GGPS1O95749 MIR4795-201ENST00000584182 89 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 SNORD114-21-201ENST00000606412 72 ntBASIC1.18□□□□□ -2.22
GGPS1O95749 MIR522-201ENST00000385071 87 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 Y_RNA.579-201ENST00000390939 94 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
GGPS1O95749 Y_RNA.713-201ENST00000517013 96 ntBASIC1.17□□□□□ -2.22
GGPS1O95749 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.17□□□□□ -2.22
GGPS1O95749 Y_RNA.197-201ENST00000364004 102 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 Y_RNA.310-201ENST00000365063 113 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 RNU6-1323P-201ENST00000384025 107 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 MTND1P14-201ENST00000427400 950 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 OR2A41P-201ENST00000473586 105 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 RNU6-475P-201ENST00000516073 104 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 RNU6-113P-201ENST00000516653 101 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 AL078603.1-201ENST00000603824 313 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 LARP7P1-201ENST00000605576 316 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 AC011373.1-201ENST00000607270 237 ntBASIC1.16□□□□□ -2.22
GGPS1O95749 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
GGPS1O95749 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 175.4 ms