Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.71□□□□□ -1.98
RAPGEF3O95398 MIR5692C2-201ENST00000577959 77 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 Z83818.1-201ENST00000603584 150 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 AP003357.1-201ENST00000604497 148 ntBASIC2.71□□□□□ -1.98
RAPGEF3O95398 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
RAPGEF3O95398 Y_RNA.172-201ENST00000363765 102 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 Y_RNA.297-201ENST00000364950 91 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 RNU6-144P-201ENST00000383951 107 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 SNORA6-201ENST00000384033 151 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 RNU6-42P-201ENST00000384165 107 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 RNA5SP465-201ENST00000391195 109 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 HMGN2P39-201ENST00000398005 273 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.7□□□□□ -1.98
RAPGEF3O95398 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.7□□□□□ -1.98
RAPGEF3O95398 RNU7-115P-201ENST00000516433 55 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 RNU1-142P-201ENST00000516682 145 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 MIR4452-201ENST00000583004 71 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 AL645939.4-201ENST00000604495 135 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 AC068647.2-201ENST00000637380 353 ntBASIC2.7□□□□□ -1.98
RAPGEF3O95398 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
RAPGEF3O95398 MIR411-201ENST00000362239 96 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 Y_RNA.191-201ENST00000363972 113 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 RNU4-13P-201ENST00000364019 141 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 Y_RNA.274-201ENST00000364714 101 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 RNU6-376P-201ENST00000384731 106 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 MIR518A2-201ENST00000384966 87 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 MTCO2P33-201ENST00000402100 465 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 BX510359.4-201ENST00000423750 193 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.69□□□□□ -1.98
RAPGEF3O95398 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 AC015720.1-201ENST00000565251 277 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 MIR5688-201ENST00000580619 83 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 MIR548AY-201ENST00000617669 107 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 AL365265.1-201ENST00000621045 234 ntBASIC2.69□□□□□ -1.98
RAPGEF3O95398 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RAPGEF3O95398 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
RAPGEF3O95398 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RAPGEF3O95398 Y_RNA.29-201ENST00000362570 113 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 SNORA3A-201ENST00000364113 130 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 MIR520G-201ENST00000385064 90 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNA5SP181-201ENST00000410246 98 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNU6-1186P-201ENST00000410429 97 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNA5SP511-201ENST00000410487 115 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNU2-64P-201ENST00000411315 191 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 Z98949.2-201ENST00000440996 144 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 HMGB3P3-201ENST00000510526 400 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNU6-63P-201ENST00000516690 95 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 RNU6-182P-201ENST00000516970 105 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 MIR4529-201ENST00000578110 78 ntBASIC2.68□□□□□ -1.98
RAPGEF3O95398 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.67□□□□□ -1.98
RAPGEF3O95398 RNU6-862P-201ENST00000362804 105 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 RNU6-1205P-201ENST00000363625 106 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 RNU6-1048P-201ENST00000364054 107 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 U8.7-201ENST00000364940 136 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.67□□□□□ -1.98
RAPGEF3O95398 MIR562-201ENST00000384894 95 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 MIR613-201ENST00000385248 95 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 RNA5SP467-201ENST00000391274 118 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 SNORA81.3-201ENST00000517283 198 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 POLR3GP1-201ENST00000594073 261 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
RAPGEF3O95398 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
RAPGEF3O95398 AC134026.1-201ENST00000623249 2239 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNA5SP325-201ENST00000363756 130 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 SNORA72-201ENST00000384339 132 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNA5SP323-201ENST00000391094 133 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNU11-3P-201ENST00000391111 133 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 MIR1283-2-201ENST00000408621 87 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.66□□□□□ -1.98
RAPGEF3O95398 Y_RNA.644-201ENST00000459006 113 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNU7-94P-201ENST00000459576 63 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RPS26P45-201ENST00000471748 340 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 Y_RNA.674-201ENST00000516362 113 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNA5SP402-201ENST00000517148 110 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 RNU7-128P-201ENST00000517247 62 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 AC024405.2-202ENST00000532731 184 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 AC127455.1-201ENST00000565496 145 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 MIR502-201ENST00000606349 86 ntBASIC2.66□□□□□ -1.98
RAPGEF3O95398 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
RAPGEF3O95398 RNU6-653P-201ENST00000363074 106 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 MIR526A2-201ENST00000390198 65 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 Y_RNA.793-201ENST00000411222 111 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 AC117454.1-201ENST00000491120 168 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 AC100767.1-201ENST00000528178 123 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.65□□□□□ -1.99
RAPGEF3O95398 CBX3P4-201ENST00000538909 354 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 AC073413.2-201ENST00000604332 360 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 AC022513.1-201ENST00000624512 117 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 U6.108-201ENST00000637764 58 ntBASIC2.65□□□□□ -1.99
RAPGEF3O95398 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.65□□□□□ -1.99
RAPGEF3O95398 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
RAPGEF3O95398 Y_RNA.293-201ENST00000364908 93 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 SNORD23.1-201ENST00000408212 104 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 SNORA36B-201ENST00000410438 131 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 MTND5P15-201ENST00000434246 349 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 AC099677.2-201ENST00000436385 175 ntBASIC2.64□□□□□ -1.99
RAPGEF3O95398 RNU7-193P-201ENST00000516723 65 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms