Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 PIGPP3-201ENST00000425307 415 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AL162725.1-201ENST00000435405 301 ntBASIC1.2□□□□□ -2.22
SIX3O95343 CHEK2P4-201ENST00000450340 246 ntBASIC1.2□□□□□ -2.22
SIX3O95343 Y_RNA.632-201ENST00000459189 102 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
SIX3O95343 SNORA31.2-201ENST00000516019 134 ntBASIC1.2□□□□□ -2.22
SIX3O95343 RNU6-1012P-201ENST00000516606 109 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AC055872.1-201ENST00000570978 278 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AC120024.3-201ENST00000603167 156 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AL590095.2-201ENST00000604136 117 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AC240442.1-201ENST00000616055 283 ntBASIC1.2□□□□□ -2.22
SIX3O95343 AL109933.3-201ENST00000619095 188 ntBASIC1.2□□□□□ -2.22
SIX3O95343 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
SIX3O95343 Y_RNA.39-201ENST00000362620 98 ntBASIC1.19□□□□□ -2.22
SIX3O95343 Y_RNA.70-201ENST00000362886 110 ntBASIC1.19□□□□□ -2.22
SIX3O95343 RNU6-1283P-201ENST00000365314 105 ntBASIC1.19□□□□□ -2.22
SIX3O95343 SNORD116-29-201ENST00000384516 83 ntBASIC1.19□□□□□ -2.22
SIX3O95343 AC091951.2-201ENST00000500762 203 ntBASIC1.19□□□□□ -2.22
SIX3O95343 CYCTP-201ENST00000504253 315 ntBASIC1.19□□□□□ -2.22
SIX3O95343 RNU6-1116P-201ENST00000517269 99 ntBASIC1.19□□□□□ -2.22
SIX3O95343 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.19□□□□□ -2.22
SIX3O95343 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.19□□□□□ -2.22
SIX3O95343 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
SIX3O95343 U6.92-201ENST00000636464 89 ntBASIC1.19□□□□□ -2.22
SIX3O95343 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.19□□□□□ -2.22
SIX3O95343 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
SIX3O95343 Y_RNA.187-201ENST00000363918 113 ntBASIC1.18□□□□□ -2.22
SIX3O95343 Y_RNA.230-201ENST00000364348 109 ntBASIC1.18□□□□□ -2.22
SIX3O95343 RNU6-708P-201ENST00000384217 107 ntBASIC1.18□□□□□ -2.22
SIX3O95343 LINC01399-202ENST00000458450 244 ntBASIC1.18□□□□□ -2.22
SIX3O95343 RNU6-917P-201ENST00000516294 104 ntBASIC1.18□□□□□ -2.22
SIX3O95343 RNU6-165P-201ENST00000517170 99 ntBASIC1.18□□□□□ -2.22
SIX3O95343 AC008269.2-201ENST00000561915 1105 ntBASIC1.18□□□□□ -2.22
SIX3O95343 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.18□□□□□ -2.22
SIX3O95343 AL117336.2-201ENST00000602435 335 ntBASIC1.18□□□□□ -2.22
SIX3O95343 Y_RNA.772-201ENST00000606692 102 ntBASIC1.18□□□□□ -2.22
SIX3O95343 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
SIX3O95343 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.18□□□□□ -2.22
SIX3O95343 AL138825.1-201ENST00000618587 192 ntBASIC1.18□□□□□ -2.22
SIX3O95343 MIR6767-201ENST00000637302 66 ntBASIC1.18□□□□□ -2.22
SIX3O95343 RNU6-1084P-201ENST00000362498 107 ntBASIC1.17□□□□□ -2.22
SIX3O95343 SNORD114-27-201ENST00000363766 70 ntBASIC1.17□□□□□ -2.22
SIX3O95343 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
SIX3O95343 AC024067.1-201ENST00000426199 223 ntBASIC1.17□□□□□ -2.22
SIX3O95343 Z98949.2-201ENST00000440996 144 ntBASIC1.17□□□□□ -2.22
SIX3O95343 RNA5SP330-201ENST00000517096 96 ntBASIC1.17□□□□□ -2.22
SIX3O95343 RN7SKP295-201ENST00000517264 153 ntBASIC1.17□□□□□ -2.22
SIX3O95343 AC022616.4-201ENST00000522985 181 ntBASIC1.17□□□□□ -2.22
SIX3O95343 MIR5000-201ENST00000577717 103 ntBASIC1.17□□□□□ -2.22
SIX3O95343 MIR548S-201ENST00000581352 82 ntBASIC1.17□□□□□ -2.22
SIX3O95343 AC091812.1-201ENST00000432235 1948 ntBASIC1.17□□□□□ -2.22
SIX3O95343 RNU1-133P-201ENST00000364867 167 ntBASIC1.16□□□□□ -2.22
SIX3O95343 RNU6-1175P-201ENST00000365200 107 ntBASIC1.16□□□□□ -2.22
SIX3O95343 Y_RNA.463-201ENST00000384271 102 ntBASIC1.16□□□□□ -2.22
SIX3O95343 SNORD116-13-201ENST00000384408 92 ntBASIC1.16□□□□□ -2.22
SIX3O95343 MIR653-201ENST00000385279 96 ntBASIC1.16□□□□□ -2.22
SIX3O95343 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SIX3O95343 RNU6-855P-201ENST00000410395 104 ntBASIC1.16□□□□□ -2.22
SIX3O95343 RNU6-710P-201ENST00000410424 105 ntBASIC1.16□□□□□ -2.22
SIX3O95343 MTND5P20-201ENST00000448677 143 ntBASIC1.16□□□□□ -2.22
SIX3O95343 SNORD19B-201ENST00000459623 84 ntBASIC1.16□□□□□ -2.22
SIX3O95343 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
SIX3O95343 RNU6-875P-201ENST00000516488 106 ntBASIC1.16□□□□□ -2.22
SIX3O95343 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.16□□□□□ -2.22
SIX3O95343 AC092447.9-201ENST00000603395 144 ntBASIC1.16□□□□□ -2.22
SIX3O95343 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SIX3O95343 Y_RNA.303-201ENST00000364998 94 ntBASIC1.15□□□□□ -2.23
SIX3O95343 Y_RNA.529-201ENST00000384586 119 ntBASIC1.15□□□□□ -2.23
SIX3O95343 AC005042.3-201ENST00000453230 174 ntBASIC1.15□□□□□ -2.23
SIX3O95343 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
SIX3O95343 Y_RNA.702-201ENST00000516843 96 ntBASIC1.15□□□□□ -2.23
SIX3O95343 Y_RNA.714-201ENST00000517065 90 ntBASIC1.15□□□□□ -2.23
SIX3O95343 MIR4801-201ENST00000582704 82 ntBASIC1.15□□□□□ -2.23
SIX3O95343 AL591926.4-201ENST00000616895 298 ntBASIC1.15□□□□□ -2.23
SIX3O95343 MIR924-201ENST00000638017 53 ntBASIC1.15□□□□□ -2.23
SIX3O95343 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SIX3O95343 RNU6-833P-201ENST00000363486 107 ntBASIC1.14□□□□□ -2.23
SIX3O95343 Y_RNA.329-201ENST00000365209 107 ntBASIC1.14□□□□□ -2.23
SIX3O95343 VTRNA1-3-201ENST00000365645 89 ntBASIC1.14□□□□□ -2.23
SIX3O95343 MIR452-201ENST00000385020 85 ntBASIC1.14□□□□□ -2.23
SIX3O95343 SNORD41-201ENST00000386967 70 ntBASIC1.14□□□□□ -2.23
SIX3O95343 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
SIX3O95343 AL390729.2-201ENST00000416137 156 ntBASIC1.14□□□□□ -2.23
SIX3O95343 AL160004.2-201ENST00000432935 350 ntBASIC1.14□□□□□ -2.23
SIX3O95343 RPS20P10-201ENST00000451209 253 ntBASIC1.14□□□□□ -2.23
SIX3O95343 AC114811.1-201ENST00000507207 168 ntBASIC1.14□□□□□ -2.23
SIX3O95343 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
SIX3O95343 RN7SKP179-201ENST00000516126 217 ntBASIC1.14□□□□□ -2.23
SIX3O95343 RNU6-436P-201ENST00000516171 114 ntBASIC1.14□□□□□ -2.23
SIX3O95343 RNU7-110P-201ENST00000516891 62 ntBASIC1.14□□□□□ -2.23
SIX3O95343 AC005972.2-201ENST00000604690 348 ntBASIC1.14□□□□□ -2.23
SIX3O95343 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
SIX3O95343 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.14□□□□□ -2.23
SIX3O95343 AC138305.3-201ENST00000624988 240 ntBASIC1.14□□□□□ -2.23
SIX3O95343 MIR4272-201ENST00000635924 64 ntBASIC1.14□□□□□ -2.23
SIX3O95343 MIRLET7C-201ENST00000362160 84 ntBASIC1.13□□□□□ -2.23
SIX3O95343 RNU4-79P-201ENST00000362764 141 ntBASIC1.13□□□□□ -2.23
SIX3O95343 Y_RNA.331-201ENST00000365267 102 ntBASIC1.13□□□□□ -2.23
SIX3O95343 RNU2-61P-201ENST00000411069 191 ntBASIC1.13□□□□□ -2.23
SIX3O95343 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms