Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 MIR338-201ENST00000636369 67 ntBASIC2.84□□□□□ -1.95
VAMP4O75379 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.84□□□□□ -1.95
VAMP4O75379 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.84□□□□□ -1.95
VAMP4O75379 RNU6-417P-201ENST00000384712 107 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 SNORA79-201ENST00000408376 140 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 RN7SKP223-201ENST00000410582 62 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 RN7SKP284-201ENST00000411002 343 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 AC009238.1-201ENST00000442165 424 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 AC009237.6-201ENST00000446969 424 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 RNA5SP200-201ENST00000516360 103 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 SNORA31.15-201ENST00000516771 132 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 AC091178.2-201ENST00000584401 117 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.83□□□□□ -1.96
VAMP4O75379 AC100821.1-201ENST00000523153 2479 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 ZNF271P-202ENST00000465539 1970 ntBASIC2.83□□□□□ -1.96
VAMP4O75379 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
VAMP4O75379 RNU6-199P-201ENST00000362954 107 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 Y_RNA.393-201ENST00000383936 102 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 SNORA40-201ENST00000388090 126 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 Y_RNA.622-201ENST00000411091 108 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.82□□□□□ -1.96
VAMP4O75379 AL356320.1-201ENST00000429616 163 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 RPS27P1-201ENST00000450552 247 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 AC023449.1-201ENST00000454464 154 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 RNU7-128P-201ENST00000517247 62 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 AC112693.2-201ENST00000556538 232 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 MIR378D2-201ENST00000580636 98 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 MIR4435-1-201ENST00000582552 80 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 MIR5002-201ENST00000584713 97 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 MIR6844-201ENST00000637122 62 ntBASIC2.82□□□□□ -1.96
VAMP4O75379 Y_RNA.796-201ENST00000364268 102 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 SNORD114-6-201ENST00000364393 72 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 Y_RNA.799-201ENST00000364992 102 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-597P-201ENST00000365620 102 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-484P-201ENST00000384016 107 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-301P-201ENST00000384277 107 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-22P-201ENST00000384355 107 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 Y_RNA.521-201ENST00000384560 114 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-160P-201ENST00000384591 107 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-768P-201ENST00000384683 107 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 AL023284.1-201ENST00000403956 276 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-62P-201ENST00000516526 102 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RNU6-197P-201ENST00000516680 100 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 RPL23AP91-201ENST00000569211 455 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 AL049861.1-201ENST00000603130 150 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 AL359075.3-201ENST00000613288 217 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 uc_338.4-201ENST00000616635 176 ntBASIC2.81□□□□□ -1.96
VAMP4O75379 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
VAMP4O75379 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
VAMP4O75379 ZNF702P-202ENST00000434269 1966 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 Y_RNA.432-201ENST00000384087 111 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNU6-1186P-201ENST00000410429 97 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.8□□□□□ -1.96
VAMP4O75379 RNU7-197P-201ENST00000458836 62 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 SNORD11-201ENST00000459124 84 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 AC104435.1-201ENST00000483483 166 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 SNORD77.4-201ENST00000516158 81 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNU6-1041P-201ENST00000516254 102 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNU6-1299P-201ENST00000516316 100 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNU6-479P-201ENST00000516348 105 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNA5SP153-201ENST00000516498 76 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 SCARNA16.3-201ENST00000516595 184 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 RNU6-1096P-201ENST00000517089 102 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.8□□□□□ -1.96
VAMP4O75379 AC073413.2-201ENST00000604332 360 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 AC080100.1-201ENST00000624239 5356 ntBASIC2.8□□□□□ -1.96
VAMP4O75379 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
VAMP4O75379 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.8□□□□□ -1.96
VAMP4O75379 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VAMP4O75379 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAMP4O75379 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAMP4O75379 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VAMP4O75379 RNU6-1209P-201ENST00000363655 107 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 MIR515-2-201ENST00000384883 83 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 MIR515-1-201ENST00000384884 83 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 SNORD37.2-201ENST00000391075 66 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 RNA5SP467-201ENST00000391274 118 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 AL117342.1-201ENST00000404861 406 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 MIR1262-201ENST00000408276 93 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 SNORA25.12-201ENST00000516202 82 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 RNU6-126P-201ENST00000516685 103 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 AL358944.1-201ENST00000528537 144 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 MIR1273D-201ENST00000577266 86 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 U6.108-201ENST00000637764 58 ntBASIC2.79□□□□□ -1.96
VAMP4O75379 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VAMP4O75379 AC018630.2-201ENST00000534866 2403 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 MIR562-201ENST00000384894 95 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 SNORA75.5-201ENST00000391291 81 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 RNA5SP425-201ENST00000410336 112 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 MTND4LP9-201ENST00000427694 174 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 ATP5J2P3-201ENST00000451550 258 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 RNA5SP272-201ENST00000516095 111 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 RNU1-142P-201ENST00000516682 145 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 RNU6-341P-201ENST00000516973 96 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 AC024995.1-201ENST00000523014 93 ntBASIC2.78□□□□□ -1.96
VAMP4O75379 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
VAMP4O75379 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.77□□□□□ -1.97
VAMP4O75379 RNU1-91P-201ENST00000364746 163 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 RNU6-1138P-201ENST00000365359 106 ntBASIC2.77□□□□□ -1.97
VAMP4O75379 SNORA67.3-201ENST00000384366 140 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms