Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 SNORA31.10-201ENST00000516482 106 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 SNORA31.17-201ENST00000516953 127 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
ZIC3O60481 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.73□□□□□ -2.13
ZIC3O60481 AC005357.1-201ENST00000588399 301 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 MIR8054-201ENST00000620877 86 ntBASIC1.73□□□□□ -2.13
ZIC3O60481 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
ZIC3O60481 AL359851.1-201ENST00000569460 4997 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.65-201ENST00000362846 100 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 RNY1-201ENST00000364228 113 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.267-201ENST00000364679 109 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.269-201ENST00000364685 89 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.476-201ENST00000384347 108 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 SNORA36B-201ENST00000410438 131 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC244636.1-201ENST00000421152 228 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 HMGN2P38-201ENST00000423806 265 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC233266.1-201ENST00000454518 96 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.638-201ENST00000459374 113 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.72□□□□□ -2.13
ZIC3O60481 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.72□□□□□ -2.13
ZIC3O60481 SNORD116-28-201ENST00000516123 91 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 Y_RNA.679-201ENST00000516416 91 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC242852.1-201ENST00000612151 96 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC073349.3-201ENST00000617616 186 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 AC244015.1-201ENST00000622301 99 ntBASIC1.72□□□□□ -2.13
ZIC3O60481 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ZIC3O60481 RNA5SP138-201ENST00000365098 114 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 RNU6-144P-201ENST00000383951 107 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 RNU6-440P-201ENST00000390882 105 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 SNORA40.18-201ENST00000391200 128 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 RNU2-7P-201ENST00000410794 178 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.71□□□□□ -2.14
ZIC3O60481 HSPE1P9-201ENST00000440046 311 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.71□□□□□ -2.14
ZIC3O60481 RPL23AP54-201ENST00000495129 419 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 MIR4524B-201ENST00000581569 115 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 AL929325.1-201ENST00000603096 117 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 AL442067.1-201ENST00000613261 223 ntBASIC1.71□□□□□ -2.14
ZIC3O60481 RNU6-1205P-201ENST00000363625 106 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 RNU6-674P-201ENST00000363831 107 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 Y_RNA.292-201ENST00000364904 97 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 RNY4P28-201ENST00000365281 93 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 RNU6-1080P-201ENST00000383982 107 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 SNORA12.1-201ENST00000390873 148 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.7□□□□□ -2.14
ZIC3O60481 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.7□□□□□ -2.14
ZIC3O60481 RNU4-71P-201ENST00000516258 113 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 RNA5SP481-201ENST00000516814 122 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 MIR4299-201ENST00000577899 72 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.7□□□□□ -2.14
ZIC3O60481 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
ZIC3O60481 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.7□□□□□ -2.14
ZIC3O60481 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC3O60481 RNU6-437P-201ENST00000459408 95 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 AL049830.1-201ENST00000468034 425 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 RNU6-388P-201ENST00000517012 105 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 RNU6-389P-201ENST00000517048 105 ntBASIC1.69□□□□□ -2.14
ZIC3O60481 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
ZIC3O60481 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
ZIC3O60481 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ZIC3O60481 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
ZIC3O60481 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
ZIC3O60481 RNU4-52P-201ENST00000384209 138 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 RNU6-950P-201ENST00000384651 107 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 MIR583-201ENST00000384846 75 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 Y_RNA.621-201ENST00000411065 96 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.68□□□□□ -2.14
ZIC3O60481 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.68□□□□□ -2.14
ZIC3O60481 snoU13.27-201ENST00000459278 104 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.68□□□□□ -2.14
ZIC3O60481 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 RNU6-295P-201ENST00000516901 104 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AC009779.6-201ENST00000603972 165 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AL627230.6-201ENST00000611129 280 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AC141273.2-201ENST00000618989 130 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AC078938.1-201ENST00000620993 318 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 AL365265.1-201ENST00000621045 234 ntBASIC1.68□□□□□ -2.14
ZIC3O60481 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
ZIC3O60481 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
ZIC3O60481 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
ZIC3O60481 Y_RNA.203-201ENST00000364106 102 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 RNU4-41P-201ENST00000364426 143 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 RNU6-1031P-201ENST00000384773 107 ntBASIC1.67□□□□□ -2.14
ZIC3O60481 MIR526A2-201ENST00000390198 65 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms