Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
ATP2A1O14983 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.64□□□□□ -2.15
ATP2A1O14983 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ATP2A1O14983 Y_RNA.136-201ENST00000363444 102 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 Y_RNA.172-201ENST00000363765 102 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU6-806P-201ENST00000365147 105 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU6-290P-201ENST00000365212 101 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU6-738P-201ENST00000384531 106 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU6-1248P-201ENST00000391096 64 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.63□□□□□ -2.15
ATP2A1O14983 RPL21P38-201ENST00000418090 167 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RPS4XP11-201ENST00000446897 772 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RPS20P10-201ENST00000451209 253 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU6-1291P-201ENST00000516591 104 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 RNU2-56P-201ENST00000516826 190 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.63□□□□□ -2.15
ATP2A1O14983 AC005972.2-201ENST00000604690 348 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 SNORA28-201ENST00000606769 126 ntBASIC1.63□□□□□ -2.15
ATP2A1O14983 AC100821.1-201ENST00000523153 2479 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 SNORA1B-201ENST00000362535 133 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 Y_RNA.26-201ENST00000362539 101 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 Y_RNA.64-201ENST00000362845 102 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 snoU2_19.2-201ENST00000363024 80 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 RNU4-80P-201ENST00000363200 141 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 Y_RNA.310-201ENST00000365063 113 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 Y_RNA.341-201ENST00000365341 102 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 RNU6-1109P-201ENST00000391187 107 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AL034345.1-201ENST00000407768 123 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AL161935.2-201ENST00000414627 60 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 MTND4LP30-201ENST00000454092 297 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.62□□□□□ -2.15
ATP2A1O14983 MTND5P22-201ENST00000458380 195 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 RNU7-28P-201ENST00000516759 62 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 RNU1-92P-201ENST00000517017 135 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AC021506.2-201ENST00000612354 169 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 AC007742.2-201ENST00000618226 398 ntBASIC1.62□□□□□ -2.15
ATP2A1O14983 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.62□□□□□ -2.15
ATP2A1O14983 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
ATP2A1O14983 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 Y_RNA.418-201ENST00000384029 102 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 RNU6-203P-201ENST00000384038 104 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 Y_RNA.569-201ENST00000384749 103 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 MIR194-1-201ENST00000384892 85 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ATP2A1O14983 SNORA12.1-201ENST00000390873 148 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 MIR1287-201ENST00000408492 90 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 MIR548F4-201ENST00000408515 105 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 STAG3L5P-204ENST00000443759 179 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 AC098869.1-201ENST00000481627 292 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 RNU6-970P-201ENST00000516312 107 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.61□□□□□ -2.15
ATP2A1O14983 PRR13P7-201ENST00000605538 430 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 AC095038.3-201ENST00000634439 195 ntBASIC1.61□□□□□ -2.15
ATP2A1O14983 Y_RNA.541-201ENST00000384640 113 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 MIR215-201ENST00000384858 110 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 DYNLT3P2-201ENST00000442517 295 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 AC233266.1-201ENST00000454518 96 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 snoU13.9-201ENST00000458927 103 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.6□□□□□ -2.15
ATP2A1O14983 AC008737.2-201ENST00000599446 118 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 AC242852.1-201ENST00000612151 96 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 AC244015.1-201ENST00000622301 99 ntBASIC1.6□□□□□ -2.15
ATP2A1O14983 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
ATP2A1O14983 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
ATP2A1O14983 RNU6-1123P-201ENST00000362347 106 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 Y_RNA.265-201ENST00000364677 108 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU6-326P-201ENST00000365480 107 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU6-1323P-201ENST00000384025 107 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 MIR499A-201ENST00000384903 122 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 SNORA53-201ENST00000391141 249 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNA5SP482-201ENST00000391269 118 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.59□□□□□ -2.15
ATP2A1O14983 AL135790.2-201ENST00000437701 267 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 MTATP8P1-201ENST00000467115 207 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 AC005908.1-201ENST00000468701 347 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU6-191P-201ENST00000516295 94 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 SCARNA15.1-201ENST00000516384 125 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU6-635P-201ENST00000516651 102 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 RNU7-116P-201ENST00000516940 62 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 AC011604.1-201ENST00000545978 196 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 AL360085.1-201ENST00000604713 532 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 AL513423.1-201ENST00000621695 132 ntBASIC1.59□□□□□ -2.15
ATP2A1O14983 Y_RNA.84-201ENST00000363011 104 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 SNORA72-201ENST00000384339 132 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 RNU6-713P-201ENST00000384761 107 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.58□□□□□ -2.16
ATP2A1O14983 MTCO1P5-201ENST00000433573 344 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 SNRPGP13-201ENST00000442212 177 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AL049830.1-201ENST00000468034 425 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 OR9P1P-201ENST00000496431 281 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 RNU2-31P-201ENST00000516954 155 ntBASIC1.58□□□□□ -2.16
ATP2A1O14983 AC136628.3-201ENST00000521868 290 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms