Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC062037.2-201ENST00000610137 73 ntBASIC1.39□□□□□ -2.19
CDX4O14627 MIR6779-201ENST00000617283 64 ntBASIC1.39□□□□□ -2.19
CDX4O14627 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
CDX4O14627 U8.1-201ENST00000362843 134 ntBASIC1.38□□□□□ -2.19
CDX4O14627 RNA5SP325-201ENST00000363756 130 ntBASIC1.38□□□□□ -2.19
CDX4O14627 Y_RNA.243-201ENST00000364481 109 ntBASIC1.38□□□□□ -2.19
CDX4O14627 Y_RNA.307-201ENST00000365022 117 ntBASIC1.38□□□□□ -2.19
CDX4O14627 Y_RNA.418-201ENST00000384029 102 ntBASIC1.38□□□□□ -2.19
CDX4O14627 Y_RNA.477-201ENST00000384352 108 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AL355796.1-201ENST00000406706 323 ntBASIC1.38□□□□□ -2.19
CDX4O14627 RNU2-7P-201ENST00000410794 178 ntBASIC1.38□□□□□ -2.19
CDX4O14627 RNA5SP100-201ENST00000410903 110 ntBASIC1.38□□□□□ -2.19
CDX4O14627 RNA5SP59-201ENST00000410922 110 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC016909.1-201ENST00000415916 166 ntBASIC1.38□□□□□ -2.19
CDX4O14627 HMGN2P34-201ENST00000437647 269 ntBASIC1.38□□□□□ -2.19
CDX4O14627 POLR2KP2-201ENST00000438155 177 ntBASIC1.38□□□□□ -2.19
CDX4O14627 SNORD65B-201ENST00000459126 73 ntBASIC1.38□□□□□ -2.19
CDX4O14627 Y_RNA.680-201ENST00000516441 93 ntBASIC1.38□□□□□ -2.19
CDX4O14627 RNA5SP481-201ENST00000516814 122 ntBASIC1.38□□□□□ -2.19
CDX4O14627 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC024995.1-201ENST00000523014 93 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.38□□□□□ -2.19
CDX4O14627 MIR3684-201ENST00000579779 74 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC012433.1-201ENST00000588916 398 ntBASIC1.38□□□□□ -2.19
CDX4O14627 DEFB117-201ENST00000602356 141 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.38□□□□□ -2.19
CDX4O14627 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.38□□□□□ -2.19
CDX4O14627 PVT1_3.1-201ENST00000620853 95 ntBASIC1.38□□□□□ -2.19
CDX4O14627 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC127459.3-201ENST00000624328 466 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC022513.1-201ENST00000624512 117 ntBASIC1.38□□□□□ -2.19
CDX4O14627 U6.104-201ENST00000637979 90 ntBASIC1.38□□□□□ -2.19
CDX4O14627 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.38□□□□□ -2.19
CDX4O14627 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
CDX4O14627 Y_RNA.14-201ENST00000362415 103 ntBASIC1.37□□□□□ -2.19
CDX4O14627 Y_RNA.124-201ENST00000363339 93 ntBASIC1.37□□□□□ -2.19
CDX4O14627 Y_RNA.401-201ENST00000383965 117 ntBASIC1.37□□□□□ -2.19
CDX4O14627 SNORA20B-201ENST00000384220 132 ntBASIC1.37□□□□□ -2.19
CDX4O14627 MIR520E-201ENST00000384867 87 ntBASIC1.37□□□□□ -2.19
CDX4O14627 AL031003.1-201ENST00000404229 172 ntBASIC1.37□□□□□ -2.19
CDX4O14627 FTH1P12-201ENST00000432137 551 ntBASIC1.37□□□□□ -2.19
CDX4O14627 AC008834.1-201ENST00000511612 175 ntBASIC1.37□□□□□ -2.19
CDX4O14627 MTND1P19-201ENST00000511780 315 ntBASIC1.37□□□□□ -2.19
CDX4O14627 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.37□□□□□ -2.19
CDX4O14627 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.37□□□□□ -2.19
CDX4O14627 RPL21P9-201ENST00000556149 474 ntBASIC1.37□□□□□ -2.19
CDX4O14627 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.37□□□□□ -2.19
CDX4O14627 AC006006.1-201ENST00000603082 144 ntBASIC1.37□□□□□ -2.19
CDX4O14627 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.37□□□□□ -2.19
CDX4O14627 MIR338-201ENST00000636369 67 ntBASIC1.37□□□□□ -2.19
CDX4O14627 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
CDX4O14627 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CDX4O14627 RNU4-80P-201ENST00000363200 141 ntBASIC1.36□□□□□ -2.19
CDX4O14627 RNU6-112P-201ENST00000363599 104 ntBASIC1.36□□□□□ -2.19
CDX4O14627 Y_RNA.447-201ENST00000384184 113 ntBASIC1.36□□□□□ -2.19
CDX4O14627 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
CDX4O14627 AL117342.1-201ENST00000404861 406 ntBASIC1.36□□□□□ -2.19
CDX4O14627 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.36□□□□□ -2.19
CDX4O14627 MTCO1P5-201ENST00000433573 344 ntBASIC1.36□□□□□ -2.19
CDX4O14627 AC099677.2-201ENST00000436385 175 ntBASIC1.36□□□□□ -2.19
CDX4O14627 SERF1AP1-201ENST00000514575 187 ntBASIC1.36□□□□□ -2.19
CDX4O14627 RNU2-31P-201ENST00000516954 155 ntBASIC1.36□□□□□ -2.19
CDX4O14627 MIR3198-2-201ENST00000577868 80 ntBASIC1.36□□□□□ -2.19
CDX4O14627 MIR3128-201ENST00000581957 66 ntBASIC1.36□□□□□ -2.19
CDX4O14627 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
CDX4O14627 MIR335-201ENST00000362173 94 ntBASIC1.35□□□□□ -2.19
CDX4O14627 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
CDX4O14627 Y_RNA.188-201ENST00000363952 111 ntBASIC1.35□□□□□ -2.19
CDX4O14627 RNU6-407P-201ENST00000365280 104 ntBASIC1.35□□□□□ -2.19
CDX4O14627 Y_RNA.350-201ENST00000365409 98 ntBASIC1.35□□□□□ -2.19
CDX4O14627 RNU6-326P-201ENST00000365480 107 ntBASIC1.35□□□□□ -2.19
CDX4O14627 Y_RNA.518-201ENST00000384552 113 ntBASIC1.35□□□□□ -2.19
CDX4O14627 Y_RNA.562-201ENST00000384695 113 ntBASIC1.35□□□□□ -2.19
CDX4O14627 RNA5SP323-201ENST00000391094 133 ntBASIC1.35□□□□□ -2.19
CDX4O14627 SNORA53-201ENST00000391141 249 ntBASIC1.35□□□□□ -2.19
CDX4O14627 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
CDX4O14627 RPL39P38-201ENST00000467018 153 ntBASIC1.35□□□□□ -2.19
CDX4O14627 RNU6-1271P-201ENST00000517049 105 ntBASIC1.35□□□□□ -2.19
CDX4O14627 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.35□□□□□ -2.19
CDX4O14627 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
CDX4O14627 AC005828.6-201ENST00000606610 232 ntBASIC1.35□□□□□ -2.19
CDX4O14627 SNORA25.1-201ENST00000362326 128 ntBASIC1.34□□□□□ -2.19
CDX4O14627 SNORA27.1-201ENST00000362604 124 ntBASIC1.34□□□□□ -2.19
CDX4O14627 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
CDX4O14627 Y_RNA.136-201ENST00000363444 102 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU6-414P-201ENST00000363705 104 ntBASIC1.34□□□□□ -2.19
CDX4O14627 Y_RNA.172-201ENST00000363765 102 ntBASIC1.34□□□□□ -2.19
CDX4O14627 Y_RNA.287-201ENST00000364853 94 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU6-662P-201ENST00000384253 104 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU6-417P-201ENST00000384712 107 ntBASIC1.34□□□□□ -2.19
CDX4O14627 MIR30A-201ENST00000385092 71 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU11-5P-201ENST00000391216 129 ntBASIC1.34□□□□□ -2.19
CDX4O14627 AL603910.2-201ENST00000407268 136 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RNU2-61P-201ENST00000411069 191 ntBASIC1.34□□□□□ -2.19
CDX4O14627 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.34□□□□□ -2.19
CDX4O14627 MTND4LP30-201ENST00000454092 297 ntBASIC1.34□□□□□ -2.19
CDX4O14627 RPS29P1-201ENST00000465274 159 ntBASIC1.34□□□□□ -2.19
CDX4O14627 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.34□□□□□ -2.19
CDX4O14627 AC010409.1-201ENST00000487382 476 ntBASIC1.34□□□□□ -2.19
CDX4O14627 AC091959.1-201ENST00000495857 238 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 266.3 ms