Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 Y_RNA.252-201ENST00000364556 101 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 Y_RNA.315-201ENST00000365117 102 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 RNU1-115P-201ENST00000365329 160 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 Y_RNA.439-201ENST00000384119 94 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 RNY1P14-201ENST00000384426 108 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 Y_RNA.570-201ENST00000384750 101 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 MCFD2P1-201ENST00000417812 300 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC188H7C350 Z98949.2-201ENST00000440996 144 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 AL133373.1-201ENST00000497098 94 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 SNORA40.14-201ENST00000516543 86 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 RNU4-77P-201ENST00000516692 156 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 Y_RNA.713-201ENST00000517013 96 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 AC005972.2-201ENST00000604690 348 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 AL121655.1-201ENST00000605811 308 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 BX284668.6-201ENST00000606899 438 ntBASIC1.21□□□□□ -2.22
CCDC188H7C350 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
CCDC188H7C350 Y_RNA.341-201ENST00000365341 102 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 Y_RNA.471-201ENST00000384312 102 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 RNU6-1199P-201ENST00000411249 104 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 MTND4LP11-201ENST00000422184 280 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 LINC01399-202ENST00000458450 244 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 SNORD111.1-201ENST00000516421 86 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 AP001094.1-201ENST00000579805 193 ntBASIC1.2□□□□□ -2.22
CCDC188H7C350 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC188H7C350 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CCDC188H7C350 RNU6-833P-201ENST00000363486 107 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 Y_RNA.172-201ENST00000363765 102 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 RNU4-50P-201ENST00000364361 141 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 Y_RNA.424-201ENST00000384063 103 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 Y_RNA.540-201ENST00000384638 111 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 RPS20P10-201ENST00000451209 253 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 U8.20-201ENST00000459445 131 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 AC114811.1-201ENST00000507207 168 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 Y_RNA.714-201ENST00000517065 90 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.19□□□□□ -2.22
CCDC188H7C350 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 AL022345.2-201ENST00000606307 135 ntBASIC1.19□□□□□ -2.22
CCDC188H7C350 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC188H7C350 MIRLET7C-201ENST00000362160 84 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 RNU4-79P-201ENST00000362764 141 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 Y_RNA.80-201ENST00000362996 102 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 Y_RNA.485-201ENST00000384395 102 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 MIR653-201ENST00000385279 96 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 MIR802-201ENST00000390235 94 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 RNU6-910P-201ENST00000390844 107 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 RNU6-131P-201ENST00000391144 107 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC188H7C350 AF228730.4-201ENST00000421457 183 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 U8.19-201ENST00000459095 133 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 HMGN1P7-201ENST00000491722 313 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 RNU6-966P-201ENST00000516479 104 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 DEFB117-201ENST00000602356 141 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 AC027279.3-201ENST00000625055 122 ntBASIC1.18□□□□□ -2.22
CCDC188H7C350 Y_RNA.5-201ENST00000362334 102 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 Y_RNA.197-201ENST00000364004 102 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 Y_RNA.253-201ENST00000364562 112 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 SNORD14.1-201ENST00000365609 90 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 Y_RNA.431-201ENST00000384086 102 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 RNU6-42P-201ENST00000384165 107 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 Y_RNA.458-201ENST00000384240 102 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 SNORA72-201ENST00000384339 132 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CCDC188H7C350 RNU4-30P-201ENST00000410245 143 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 AC048334.1-201ENST00000477975 159 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 AC040926.1-201ENST00000530195 238 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 AC010205.1-201ENST00000616668 449 ntBASIC1.17□□□□□ -2.22
CCDC188H7C350 Y_RNA.112-201ENST00000363250 102 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 Y_RNA.143-201ENST00000363520 106 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 Y_RNA.462-201ENST00000384268 102 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 MIR618-201ENST00000385287 98 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 AL133255.1-201ENST00000606374 441 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 SNORD58B-201ENST00000607313 66 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 JPX_2.1-201ENST00000614161 69 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 AC007485.1-201ENST00000616755 206 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 AL353770.2-201ENST00000620024 78 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 AC090971.5-201ENST00000621102 293 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 AC091925.1-201ENST00000623204 462 ntBASIC1.16□□□□□ -2.22
CCDC188H7C350 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC188H7C350 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
CCDC188H7C350 snoU2-30.1-201ENST00000365012 70 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 Y_RNA.445-201ENST00000384168 102 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 RNU6-937P-201ENST00000384325 106 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 MIR526A1-201ENST00000384897 85 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 MIR516B2-201ENST00000385190 85 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 SNRPGP10-201ENST00000432323 225 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 POLR2KP2-201ENST00000438155 177 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC188H7C350 RNA5SP220-201ENST00000516298 104 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 RNA5SP102-201ENST00000516865 106 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 RNU7-116P-201ENST00000516940 62 ntBASIC1.15□□□□□ -2.23
CCDC188H7C350 MIR3145-201ENST00000580727 82 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms