Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC141557.1-201ENST00000540982 400 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR4435-1-201ENST00000582552 80 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR450A2-201ENST00000385022 100 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD78.1-201ENST00000390866 65 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP344-201ENST00000411081 104 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC011406.1-201ENST00000512440 370 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP236-201ENST00000516169 116 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AP000867.2-201ENST00000532468 320 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL365205.2-201ENST00000594586 68 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC010889.1-201ENST00000566193 2666 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU4-82P-201ENST00000362443 140 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.66-201ENST00000362862 102 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-414P-201ENST00000363705 104 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1134P-201ENST00000365156 101 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.323-201ENST00000365157 109 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 COX6CP6-201ENST00000490840 228 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP148-201ENST00000516527 94 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.685-201ENST00000516532 108 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD19.2-201ENST00000516978 73 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD115-40-201ENST00000606510 82 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.362-201ENST00000365518 110 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-820P-201ENST00000384273 107 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL117342.1-201ENST00000404861 406 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP225-201ENST00000410874 135 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC245102.2-201ENST00000448956 180 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-221P-201ENST00000459541 99 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPL36AP48-201ENST00000485521 314 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-94P-201ENST00000607728 107 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC013412.1-201ENST00000610687 192 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 JPX_2.1-201ENST00000614161 69 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MALAT1.1-201ENST00000618249 95 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNY1P10-201ENST00000363268 113 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD32B-201ENST00000364460 84 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-117P-201ENST00000365415 107 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR562-201ENST00000384894 95 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MTATP8P2-201ENST00000435212 202 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PGBD4P5-201ENST00000445958 426 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-240P-201ENST00000516098 97 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-504P-201ENST00000516568 104 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC011604.1-201ENST00000545978 196 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPL17P51-201ENST00000605218 238 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-418P-201ENST00000384035 107 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR300-201ENST00000401138 83 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR5009-201ENST00000578736 100 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR4662B-201ENST00000579498 81 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 U6.73-201ENST00000619194 103 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC134878.1-201ENST00000619901 243 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 U4.3-201ENST00000621047 82 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.219-201ENST00000364232 113 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 SNORD61-201ENST00000384252 73 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-972P-201ENST00000391208 107 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RN7SL499P-201ENST00000481141 276 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms