Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC141557.1-201ENST00000540982 400 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR2681-201ENST00000581814 105 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR4435-1-201ENST00000582552 80 ntBASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR450A2-201ENST00000385022 100 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD78.1-201ENST00000390866 65 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP344-201ENST00000411081 104 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPS4XP11-201ENST00000446897 772 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SEM1P1-201ENST00000506694 209 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC011406.1-201ENST00000512440 370 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP236-201ENST00000516169 116 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1270P-201ENST00000517128 108 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AP000867.2-201ENST00000532468 320 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR3609-201ENST00000582661 80 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL365205.2-201ENST00000594586 68 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC090517.3-201ENST00000625170 141 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC010889.1-201ENST00000566193 2666 ntBASIC2.63□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU4-82P-201ENST00000362443 140 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.66-201ENST00000362862 102 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-414P-201ENST00000363705 104 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1134P-201ENST00000365156 101 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.323-201ENST00000365157 109 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 COX6CP6-201ENST00000490840 228 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP148-201ENST00000516527 94 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.685-201ENST00000516532 108 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-1149P-201ENST00000516810 97 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD19.2-201ENST00000516978 73 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR3117-201ENST00000584034 78 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD115-40-201ENST00000606510 82 ntBASIC2.62□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.362-201ENST00000365518 110 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-820P-201ENST00000384273 107 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL117342.1-201ENST00000404861 406 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD88.1-201ENST00000408684 91 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNA5SP225-201ENST00000410874 135 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC245102.2-201ENST00000448956 180 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-221P-201ENST00000459541 99 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPL36AP48-201ENST00000485521 314 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-94P-201ENST00000607728 107 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC013412.1-201ENST00000610687 192 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 JPX_2.1-201ENST00000614161 69 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MALAT1.1-201ENST00000618249 95 ntBASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNY1P10-201ENST00000363268 113 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 SNORD32B-201ENST00000364460 84 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-117P-201ENST00000365415 107 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR562-201ENST00000384894 95 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 Y_RNA.621-201ENST00000411065 96 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MTATP8P2-201ENST00000435212 202 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 PGBD4P5-201ENST00000445958 426 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-240P-201ENST00000516098 97 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-504P-201ENST00000516568 104 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC011604.1-201ENST00000545978 196 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RPL17P51-201ENST00000605218 238 ntBASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.6□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-418P-201ENST00000384035 107 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR300-201ENST00000401138 83 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR5009-201ENST00000578736 100 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 MIR4662B-201ENST00000579498 81 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 U6.73-201ENST00000619194 103 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC134878.1-201ENST00000619901 243 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 U4.3-201ENST00000621047 82 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 AC110079.1-202ENST00000635213 138 ntBASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.59□□□□□ -1.99
C1QTNF3-AMACRE9PGA6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 Y_RNA.219-201ENST00000364232 113 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-1138P-201ENST00000365359 106 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 SNORD61-201ENST00000384252 73 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNU6-972P-201ENST00000391208 107 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
C1QTNF3-AMACRE9PGA6 RN7SL499P-201ENST00000481141 276 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms