Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CYCSP23-201ENST00000519781 313 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 MIR8074-201ENST00000615081 81 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 AC127459.3-201ENST00000624328 466 ntBASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
TRIM49D1C9J1S8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 MIR26B-201ENST00000362251 77 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.183-201ENST00000363882 113 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.396-201ENST00000383949 103 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-574P-201ENST00000384265 107 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1160P-201ENST00000384546 104 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1011P-201ENST00000384668 107 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 MIR568-201ENST00000385036 95 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RNU1-78P-201ENST00000391248 165 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-855P-201ENST00000410395 104 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AL161935.2-201ENST00000414627 60 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC245517.4-201ENST00000448601 281 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RPS20P10-201ENST00000451209 253 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC005042.3-201ENST00000453230 174 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC093850.1-201ENST00000454121 251 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC233266.1-201ENST00000454518 96 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 snoU13.27-201ENST00000459278 104 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 RPL36AP21-201ENST00000490372 323 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 TRMT112P2-201ENST00000512910 132 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 MIR4778-201ENST00000577635 80 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC008737.2-201ENST00000599446 118 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC242852.1-201ENST00000612151 96 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AL157834.3-201ENST00000615543 103 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 AC244015.1-201ENST00000622301 99 ntBASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.84-201ENST00000363011 104 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-770P-201ENST00000363929 105 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-801P-201ENST00000364087 105 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.310-201ENST00000365063 113 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-472P-201ENST00000384299 107 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-738P-201ENST00000384531 106 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-21P-201ENST00000384710 107 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 MIR194-1-201ENST00000384892 85 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-440P-201ENST00000390882 105 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU5A-5P-201ENST00000411054 116 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 MTCO1P5-201ENST00000433573 344 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 U8.19-201ENST00000459095 133 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1146P-201ENST00000516282 102 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-635P-201ENST00000516651 102 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 SCARNA24.2-201ENST00000516968 130 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 AP003733.2-201ENST00000529409 171 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 MIR4781-201ENST00000585250 76 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.812-201ENST00000610788 101 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.784-201ENST00000613803 101 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 AP001282.2-201ENST00000616149 309 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.787-201ENST00000616522 101 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.780-201ENST00000617336 101 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 AL138825.1-201ENST00000618587 192 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.801-201ENST00000619005 101 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 AC106754.2-201ENST00000623006 233 ntBASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.12□□□□□ -2.23
TRIM49D1C9J1S8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 MIR302D-201ENST00000362275 68 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1309P-201ENST00000363305 108 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 RNU4-41P-201ENST00000364426 143 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-662P-201ENST00000384253 104 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 SNORD63-201ENST00000384262 68 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.581-201ENST00000391017 97 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 U8.16-201ENST00000391279 133 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 Z98949.2-201ENST00000440996 144 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AL118496.2-201ENST00000448300 230 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AC117454.1-201ENST00000491120 168 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 OR9P1P-201ENST00000496431 281 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-191P-201ENST00000516295 94 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.720-201ENST00000517166 92 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 SUMO2P16-201ENST00000519475 264 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AC006380.1-201ENST00000603598 186 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AL355297.3-201ENST00000604082 446 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AP001485.1-201ENST00000604799 199 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 AC068647.2-201ENST00000637380 353 ntBASIC1.11□□□□□ -2.23
TRIM49D1C9J1S8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 MIRLET7C-201ENST00000362160 84 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNY1P10-201ENST00000363268 113 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.117-201ENST00000363294 101 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 SNORA63-201ENST00000363450 132 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNU4-10P-201ENST00000364383 140 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-392P-201ENST00000364926 101 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 U8.7-201ENST00000364940 136 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.376-201ENST00000365638 108 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 RNU6-1310P-201ENST00000384153 107 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 Y_RNA.462-201ENST00000384268 102 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 SNRPGP10-201ENST00000432323 225 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 AL162725.1-201ENST00000435405 301 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 POLR2KP2-201ENST00000438155 177 ntBASIC1.1□□□□□ -2.23
TRIM49D1C9J1S8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms