Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 AL773524.1-201ENST00000614065 229 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 JPX_2.1-201ENST00000614161 69 ntBASIC2.03□□□□□ -2.08
MBD3L4A6NDZ8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 MIR21-201ENST00000362134 72 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.83-201ENST00000363005 113 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-482P-201ENST00000391068 107 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 AC009310.1-201ENST00000414414 451 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 SNORA31.10-201ENST00000516482 106 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 MIR6766-201ENST00000622641 72 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 MIR6873-201ENST00000622788 63 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 AC092881.1-201ENST00000638218 2733 ntBASIC2.02□□□□□ -2.09
MBD3L4A6NDZ8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 SNORD68-201ENST00000363214 84 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.253-201ENST00000364562 112 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 RNU4-17P-201ENST00000365598 141 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 MIR1278-201ENST00000408753 81 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 COX6CP14-201ENST00000469580 174 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 HMGN1P7-201ENST00000491722 313 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 RNY3P16-201ENST00000516338 101 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 AC121758.2-201ENST00000553271 193 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 MIR4299-201ENST00000577899 72 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 MIR5694-201ENST00000581190 76 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 MIR2681-201ENST00000581814 105 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 AL591926.4-201ENST00000616895 298 ntBASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.01□□□□□ -2.09
MBD3L4A6NDZ8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
MBD3L4A6NDZ8 AL596028.1-201ENST00000326971 197 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR411-201ENST00000362239 96 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR126-201ENST00000362291 85 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.24-201ENST00000362508 103 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-653P-201ENST00000363074 106 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-674P-201ENST00000363831 107 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-969P-201ENST00000383900 105 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR526A2-201ENST00000390198 65 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNA5SP482-201ENST00000391269 118 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-493P-201ENST00000391321 108 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 AL034345.1-201ENST00000407768 123 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 AL139156.1-201ENST00000412785 841 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 SNRPGP10-201ENST00000432323 225 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNU7-28P-201ENST00000516759 62 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR3670-2-201ENST00000582974 65 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR3670-1-201ENST00000584160 65 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR3670-3-201ENST00000584855 65 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 MIR3670-4-201ENST00000612260 65 ntBASIC2□□□□□ -2.09
MBD3L4A6NDZ8 RNA5SP99-201ENST00000364020 114 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-923P-201ENST00000364753 107 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.572-201ENST00000384757 98 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 MIR144-201ENST00000384886 86 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 MIR221-201ENST00000385135 110 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 IGLV3-17-201ENST00000519099 244 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 RPL23AP91-201ENST00000569211 455 ntBASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-1209P-201ENST00000363655 107 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.274-201ENST00000364714 101 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.297-201ENST00000364950 91 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-1031P-201ENST00000384773 107 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 MIR626-201ENST00000385032 94 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 AL603825.1-201ENST00000438481 80 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-138P-201ENST00000515952 107 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 RNA5SP200-201ENST00000516360 103 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-548P-201ENST00000517083 115 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.98□□□□□ -2.09
MBD3L4A6NDZ8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.796-201ENST00000364268 102 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 RNU6-200P-201ENST00000364743 107 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.799-201ENST00000364992 102 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 DEFA7P-201ENST00000382676 285 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 AC023449.1-201ENST00000454464 154 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 SCARNA16.3-201ENST00000516595 184 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 Y_RNA.714-201ENST00000517065 90 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 MIR4713-201ENST00000582691 75 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 AC009831.4-201ENST00000620744 325 ntBASIC1.97□□□□□ -2.09
MBD3L4A6NDZ8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 ICE2P2-201ENST00000483823 2787 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 MIR6073-201ENST00000352083 89 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-414P-201ENST00000363705 104 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 RNU6-439P-201ENST00000384188 106 ntBASIC1.96□□□□□ -2.1
MBD3L4A6NDZ8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms