Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RN7SKP295-201ENST00000517264 153 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AC040926.1-201ENST00000530195 238 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AC011604.1-201ENST00000545978 196 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 RPL21P9-201ENST00000556149 474 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MIR4422-201ENST00000581938 83 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 FAM106DP-201ENST00000586416 501 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 SNORD114-21-201ENST00000606412 72 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AC010205.1-201ENST00000616668 449 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MIR6734-201ENST00000621166 68 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 MIR6767-201ENST00000637302 66 ntBASIC0.84□□□□□ -2.27
TRAV40A0A0B4J280 AC068700.1-201ENST00000565862 3754 ntBASIC0.84□□□□□ -2.28
TRAV40A0A0B4J280 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 MIR26B-201ENST00000362251 77 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.39-201ENST00000362620 98 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.61-201ENST00000362835 102 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-806P-201ENST00000365147 105 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.331-201ENST00000365267 102 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.355-201ENST00000365462 98 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.471-201ENST00000384312 102 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 SNORD41-201ENST00000386967 70 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RNU2-14P-201ENST00000411053 191 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.621-201ENST00000411065 96 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RPL30P13-201ENST00000418873 348 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 FTH1P12-201ENST00000432137 551 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 AC245517.4-201ENST00000448601 281 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RPS20P10-201ENST00000451209 253 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 snoU13.25-201ENST00000458945 104 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 snoU13.18-201ENST00000459483 104 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-113P-201ENST00000516653 101 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RNU2-56P-201ENST00000516826 190 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 MIR3664-201ENST00000579074 99 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 RAC1P9-201ENST00000604990 392 ntBASIC0.83□□□□□ -2.28
TRAV40A0A0B4J280 AC131280.1-202ENST00000624067 4211 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNU4-38P-201ENST00000364472 129 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.445-201ENST00000384168 102 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.535-201ENST00000384612 99 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-121P-201ENST00000410525 99 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 SNRPGP10-201ENST00000432323 225 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AC098869.1-201ENST00000481627 292 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNU7-12P-201ENST00000516030 62 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-1278P-201ENST00000516130 107 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNA5SP220-201ENST00000516298 104 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 SNORA40.14-201ENST00000516543 86 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-1137P-201ENST00000517073 99 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AC006380.1-201ENST00000603598 186 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AL121890.5-201ENST00000620848 304 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AC090971.5-201ENST00000621102 293 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AL513423.1-201ENST00000621695 132 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AL160413.1-201ENST00000622780 310 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 AL008636.1-201ENST00000625038 1018 ntBASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
TRAV40A0A0B4J280 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORD68-201ENST00000363214 84 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.796-201ENST00000364268 102 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 RNU4-76P-201ENST00000364509 141 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.799-201ENST00000364992 102 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.310-201ENST00000365063 113 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORA22B-201ENST00000383876 138 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORA22-201ENST00000383907 134 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORD26-201ENST00000384147 75 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORA22C-201ENST00000384614 134 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 MIR1278-201ENST00000408753 81 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-855P-201ENST00000410395 104 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNX2P2-201ENST00000424553 323 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 RNU7-94P-201ENST00000459576 63 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 RNU7-110P-201ENST00000516891 62 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 AP002004.2-201ENST00000531656 154 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SNORA4-201ENST00000584302 138 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 RPS29P30-201ENST00000600975 111 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 PRR13P7-201ENST00000605538 430 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 MIR7111-201ENST00000619751 72 ntBASIC0.81□□□□□ -2.28
TRAV40A0A0B4J280 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AC134026.1-201ENST00000623249 2239 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 RNU4-80P-201ENST00000363200 141 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.230-201ENST00000364348 109 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 U8.7-201ENST00000364940 136 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.363-201ENST00000365529 113 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 SNORD14.1-201ENST00000365609 90 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-950P-201ENST00000384651 107 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 Y_RNA.551-201ENST00000384661 102 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-823P-201ENST00000391042 103 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR1302-11-201ENST00000408051 138 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR1302-9-201ENST00000408365 138 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 MIR1302-10-201ENST00000408734 138 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AC114811.1-201ENST00000507207 168 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 RNU6-1170P-201ENST00000515974 106 ntBASIC0.8□□□□□ -2.28
TRAV40A0A0B4J280 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms