Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 SNORD81.2-201ENST00000365153 76 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-708P-201ENST00000384217 107 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 MIR499A-201ENST00000384903 122 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 MIR522-201ENST00000385071 87 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 MT-TL1-201ENST00000386347 75 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNU2-61P-201ENST00000411069 191 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-1199P-201ENST00000411249 104 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-436P-201ENST00000516171 114 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-1012P-201ENST00000516606 109 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 AC136628.3-201ENST00000521868 290 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 MIR4659A-201ENST00000580269 81 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 MIR4762-201ENST00000585261 75 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 AC005972.2-201ENST00000604690 348 ntBASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV39A0A0B4J263 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-1335P-201ENST00000365426 107 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 RNY3P4-201ENST00000384428 101 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-131P-201ENST00000391144 107 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 MIR1185-1-201ENST00000408598 86 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 AC006461.1-201ENST00000412637 326 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 RPS26P5-201ENST00000418544 335 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 FGF7P6-202ENST00000451282 293 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.653-201ENST00000459091 95 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 AC117454.1-201ENST00000491120 168 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-559P-201ENST00000516151 98 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 AC108706.1-201ENST00000611053 297 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 U2.1-201ENST00000618978 145 ntBASIC0.61□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.166-201ENST00000363730 102 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.248-201ENST00000364501 109 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 snoU2-30.1-201ENST00000365012 70 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.329-201ENST00000365209 107 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.599-201ENST00000410489 109 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 AL035398.1-201ENST00000430869 322 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 FABP5P4-201ENST00000437203 171 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 AC022616.4-201ENST00000522985 181 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 AC109810.1-201ENST00000534066 224 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 MIR4764-201ENST00000580680 88 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 AC131055.1-201ENST00000584626 316 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 U6atac.1-201ENST00000616025 117 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 MIR8070-201ENST00000616510 88 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
TRAV39A0A0B4J263 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 Y_RNA.164-201ENST00000363709 102 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 SNORD50B-201ENST00000364995 70 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 AC117470.1-201ENST00000381974 330 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 MIR1276-201ENST00000408707 83 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 RNU6-855P-201ENST00000410395 104 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 MTND1P2-201ENST00000430604 821 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 SNRPGP10-201ENST00000432323 225 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 7SK.10-201ENST00000621414 298 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 MTND4LP32-201ENST00000636111 270 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 U6.92-201ENST00000636464 89 ntBASIC0.59□□□□□ -2.31
TRAV39A0A0B4J263 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.146-201ENST00000363549 102 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 SNORA72-201ENST00000384339 132 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 MTND5P15-201ENST00000434246 349 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 SNORD123-201ENST00000459473 70 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 AC136443.5-201ENST00000603741 370 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-94P-201ENST00000607728 107 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 AC104465.1-201ENST00000611365 139 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 AC022306.2-201ENST00000617563 647 ntBASIC0.58□□□□□ -2.32
TRAV39A0A0B4J263 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.148-201ENST00000363557 117 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 RNU1-93P-201ENST00000364704 169 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-1175P-201ENST00000365200 107 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 MIR520E-201ENST00000384867 87 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 MIR15B-201ENST00000385045 98 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.619-201ENST00000410951 90 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 MCFD2P1-201ENST00000417812 300 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.714-201ENST00000517065 90 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-699P-201ENST00000517081 110 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AP003716.2-201ENST00000528260 108 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AC006600.1-201ENST00000572529 153 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AC113139.1-201ENST00000605049 239 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AC022441.3-201ENST00000605737 136 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 AC092794.1-201ENST00000612734 582 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 MIR6835-201ENST00000621552 64 ntBASIC0.57□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.259-201ENST00000364619 101 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.341-201ENST00000365341 102 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 SNORD114-22-201ENST00000365423 72 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.368-201ENST00000365547 113 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 Y_RNA.474-201ENST00000384341 102 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 MIR508-201ENST00000384857 115 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 HMGN2P32-201ENST00000444648 269 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 RN7SKP164-201ENST00000516138 266 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 RNU7-43P-201ENST00000516554 64 ntBASIC0.56□□□□□ -2.32
TRAV39A0A0B4J263 RN7SKP295-201ENST00000517264 153 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms