Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 U6.115-201ENST00000636045 103 ntBASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.89□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR30D-201ENST00000362283 70 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 MIR7-2-201ENST00000384970 110 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-847P-201ENST00000411115 108 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 MTCO2P21-201ENST00000419780 677 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 SNRPGP14-201ENST00000435400 219 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 Z82188.1-201ENST00000436709 154 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 MTATP6P26-201ENST00000445926 662 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 snoU13.2-201ENST00000459201 104 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU6-276P-201ENST00000516114 96 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 RNU7-181P-201ENST00000517234 74 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 UBL5P4-201ENST00000562584 236 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-0.9□□□□□ -2.55
TRAV1-2A0A0B4J238 SNORD114-7-201ENST00000362520 77 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU5F-3P-201ENST00000363767 117 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 MT-TF-201ENST00000387314 71 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-131P-201ENST00000391144 107 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 MTCO2P8-201ENST00000412213 658 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 SSR1P2-201ENST00000415208 787 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 AC073464.1-201ENST00000429823 534 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 snoU13.16-201ENST00000459350 104 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 AC105029.1-201ENST00000520250 669 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 U2.17-201ENST00000611454 95 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 AC010205.1-201ENST00000616668 449 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 AL162376.1-201ENST00000624117 175 ntBASIC-0.91□□□□□ -2.56
TRAV1-2A0A0B4J238 ZNF299P-201ENST00000406845 1804 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORD50.1-201ENST00000362987 71 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-324P-201ENST00000363957 106 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORD38B-201ENST00000384690 67 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR1-2-201ENST00000384961 85 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR153-2-201ENST00000385225 87 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 AL008987.1-201ENST00000415528 237 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 GPR143P-201ENST00000434155 205 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 Vault.3-201ENST00000516676 95 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 PIGPP4-201ENST00000584447 307 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 POLR3GP1-201ENST00000594073 261 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 AL133173.2-201ENST00000614270 90 ntBASIC-0.92□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU5F-6P-201ENST00000362979 116 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORA1.2-201ENST00000365189 134 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORA22B-201ENST00000383876 138 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-606P-201ENST00000384721 111 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 RNY1P7-201ENST00000384743 110 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR196A1-201ENST00000388006 70 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORA3B-201ENST00000391305 131 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU4-83P-201ENST00000410863 133 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 AC022878.1-201ENST00000530684 149 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 AL355297.3-201ENST00000604082 446 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 AC069431.2-201ENST00000604149 1099 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 AP001330.5-201ENST00000607176 411 ntBASIC-0.93□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-726P-201ENST00000364680 107 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-108P-201ENST00000365558 107 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-157P-201ENST00000383957 107 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORA24-201ENST00000384096 131 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-1257P-201ENST00000384625 110 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-475P-201ENST00000516073 104 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 IGKV1-22-201ENST00000524313 326 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 AL137161.1-201ENST00000532231 390 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 AC245008.1-201ENST00000608123 476 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR8055-201ENST00000610739 97 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 AL049777.1-201ENST00000622740 518 ntBASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-0.94□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU4-92P-201ENST00000363783 136 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORD14E-201ENST00000364009 85 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 MIR521-1-201ENST00000384902 87 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 AC022616.4-201ENST00000522985 181 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 AC104576.1-201ENST00000524225 88 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 AL157687.1-201ENST00000554853 619 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 AP001542.1-201ENST00000591314 200 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 AL158063.1-201ENST00000615349 536 ntBASIC-0.95□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORD95.1-201ENST00000364099 68 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORA1-201ENST00000384107 130 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AL590002.1-201ENST00000406554 418 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 SNORD93-201ENST00000408813 74 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-325P-201ENST00000411132 105 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 AC236972.2-201ENST00000434979 310 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 Y_RNA.683-201ENST00000516508 93 ntBASIC-0.96□□□□□ -2.56
TRAV1-2A0A0B4J238 RNU6-765P-201ENST00000516916 99 ntBASIC-0.96□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms