Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 AP002392.1-201ENST00000537692 208 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 MIR3169-201ENST00000578032 83 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 AL353149.1-201ENST00000610667 244 ntBASIC2.47□□□□□ -2.01
NR2E3Q9Y5X4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
NR2E3Q9Y5X4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 SNORA27.1-201ENST00000362604 124 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 SNORA72.4-201ENST00000384174 132 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-493P-201ENST00000391321 108 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 HMGN2P39-201ENST00000398005 273 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC024067.1-201ENST00000426199 223 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 RPL23AP7-203ENST00000449021 469 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC074198.2-201ENST00000508153 258 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC121758.2-201ENST00000553271 193 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 AC131280.1-202ENST00000624067 4211 ntBASIC2.46□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1248P-201ENST00000391096 64 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-710P-201ENST00000410424 105 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 RN7SKP51-201ENST00000410781 304 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AC005840.1-201ENST00000498412 377 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-861P-201ENST00000516745 106 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AC009127.3-201ENST00000570531 403 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 MIR5692C2-201ENST00000577959 77 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AL359821.1-201ENST00000605519 182 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 AC067747.1-201ENST00000608026 250 ntBASIC2.45□□□□□ -2.02
NR2E3Q9Y5X4 CENPCP1-201ENST00000533085 2578 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.308-201ENST00000365043 101 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.435-201ENST00000384095 112 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 MIR518A2-201ENST00000384966 87 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 RNA5SP465-201ENST00000391195 109 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AL023284.1-201ENST00000403956 276 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AL603908.1-201ENST00000406098 201 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AL445646.1-201ENST00000431784 216 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 HMGN2P34-201ENST00000437647 269 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 RNA5SP182-201ENST00000516064 82 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AC100767.1-201ENST00000528178 123 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AL137100.2-201ENST00000555786 315 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AC245884.12-201ENST00000615364 59 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 AC013791.1-201ENST00000616619 62 ntBASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.44□□□□□ -2.02
NR2E3Q9Y5X4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.270-201ENST00000364693 104 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 SNORD116-13-201ENST00000384408 92 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 AC010154.1-201ENST00000425857 269 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 RPS15AP28-201ENST00000435088 386 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 AC005786.1-201ENST00000588553 154 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 MIR338-201ENST00000636369 67 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 AC134026.1-201ENST00000623249 2239 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
NR2E3Q9Y5X4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.262-201ENST00000364641 102 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 MIR1283-2-201ENST00000408621 87 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-855P-201ENST00000410395 104 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 HSPE1P13-201ENST00000451143 297 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RPS26P55-201ENST00000471178 356 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNA5SP20-201ENST00000515976 84 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1337P-201ENST00000516525 95 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-255P-201ENST00000516957 105 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1212P-201ENST00000517023 104 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 AC072026.1-201ENST00000605023 201 ntBASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-407P-201ENST00000365280 104 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-117P-201ENST00000365415 107 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 Y_RNA.464-201ENST00000384282 110 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 MIR515-2-201ENST00000384883 83 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 MIR515-1-201ENST00000384884 83 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 BTF3P4-201ENST00000418852 495 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC104332.1-201ENST00000440471 797 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RPS20P10-201ENST00000451209 253 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RNU7-141P-201ENST00000459304 62 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RPS27P22-201ENST00000478056 241 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 RNU6-1219P-201ENST00000516143 112 ntBASIC2.41□□□□□ -2.02
NR2E3Q9Y5X4 SNORA31.25-201ENST00000517242 134 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms