Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AL358944.1-201ENST00000528537 144 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AP002004.2-201ENST00000531656 154 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AL512310.8-201ENST00000550183 120 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AC022441.3-201ENST00000605737 136 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 SNORD58B-201ENST00000607313 66 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 AL365434.2-201ENST00000607979 234 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR6734-201ENST00000621166 68 ntBASIC1.32□□□□□ -2.2
PCDHGA1Q9Y5H4 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.265-201ENST00000364677 108 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR613-201ENST00000385248 95 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR320A-201ENST00000385302 82 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RNA5SP511-201ENST00000410487 115 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU2-61P-201ENST00000411069 191 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 AC022028.1-201ENST00000412054 408 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 AL160004.2-201ENST00000432935 350 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RPL39P38-201ENST00000467018 153 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-1337P-201ENST00000516525 95 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU2-56P-201ENST00000516826 190 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 AC019288.1-201ENST00000557918 224 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR3664-201ENST00000579074 99 ntBASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.458-201ENST00000384240 102 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-136P-201ENST00000384663 107 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR660-201ENST00000385235 97 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 AL162725.1-201ENST00000435405 301 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 OR9P1P-201ENST00000496431 281 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-436P-201ENST00000516171 114 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-155P-201ENST00000516347 100 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-966P-201ENST00000516479 104 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-1291P-201ENST00000516591 104 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RN7SKP88-201ENST00000516847 250 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-1096P-201ENST00000517089 102 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 AC011604.1-201ENST00000545978 196 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 RPS29P30-201ENST00000600975 111 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 AL513534.2-201ENST00000603836 250 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 7SK.8-201ENST00000612110 250 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 7SK.11-201ENST00000615477 250 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 7SK.13-201ENST00000622040 250 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 uc_338.22-201ENST00000622722 187 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 SNORD3E-202ENST00000627253 216 ntBASIC1.3□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.80-201ENST00000362996 102 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RNY1-201ENST00000364228 113 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.431-201ENST00000384086 102 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-424P-201ENST00000384367 105 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.485-201ENST00000384395 102 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.570-201ENST00000384750 101 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR7-2-201ENST00000384970 110 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 AL354751.2-201ENST00000415471 210 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RNA5SP168-201ENST00000516642 112 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RN7SKP295-201ENST00000517264 153 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 CYP3A52P-201ENST00000563326 91 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR4423-201ENST00000580922 80 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 AL121655.1-201ENST00000605811 308 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.772-201ENST00000606692 102 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU1-93P-201ENST00000364704 169 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-1175P-201ENST00000365200 107 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.462-201ENST00000384268 102 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 Y_RNA.509-201ENST00000384506 99 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 RNA5SP482-201ENST00000391269 118 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 CALM2P4-201ENST00000430810 426 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC233266.1-201ENST00000454518 96 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AL049830.1-201ENST00000468034 425 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC093852.1-201ENST00000503587 266 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 RNU6-475P-201ENST00000516073 104 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 C8orf59P2-201ENST00000603441 271 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC006157.1-201ENST00000611750 366 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC242852.1-201ENST00000612151 96 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC244015.1-201ENST00000622301 99 ntBASIC1.28□□□□□ -2.2
PCDHGA1Q9Y5H4 AC005592.1-201ENST00000566527 1640 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 MIR96-201ENST00000362288 78 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 RNU6-324P-201ENST00000363957 106 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 SNORD42.2-201ENST00000365570 69 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 SNORA70.7-201ENST00000384159 133 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 Y_RNA.526-201ENST00000384572 110 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 U8.16-201ENST00000391279 133 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 AL390729.2-201ENST00000416137 156 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 AC022709.1-201ENST00000615967 87 ntBASIC1.27□□□□□ -2.21
PCDHGA1Q9Y5H4 Y_RNA.172-201ENST00000363765 102 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 RNU4-41P-201ENST00000364426 143 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 RNU4-76P-201ENST00000364509 141 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 RNU6-867P-201ENST00000364956 107 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 Y_RNA.419-201ENST00000384041 102 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 SNORD116-13-201ENST00000384408 92 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 MTND1P14-201ENST00000427400 950 ntBASIC1.26□□□□□ -2.21
PCDHGA1Q9Y5H4 RPEP5-201ENST00000441137 268 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms