Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 RPS12P2-201ENST00000439728 269 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 SCARNA8-201ENST00000515924 131 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 AC109810.1-201ENST00000534066 224 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 MIR1273D-201ENST00000577266 86 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 AC016717.2-201ENST00000609089 5141 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AC007336.1-201ENST00000576365 3828 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 RNU1-23P-201ENST00000363361 144 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.229-201ENST00000364347 113 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-1240P-201ENST00000365155 104 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.488-201ENST00000384403 102 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 SNORA80E-201ENST00000384744 137 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 MIR95-201ENST00000385072 81 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AC010154.1-201ENST00000425857 269 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 PRELID2P1-201ENST00000552837 301 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 POLR3GP1-201ENST00000594073 261 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AC005972.2-201ENST00000604690 348 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AL391903.3-201ENST00000612158 163 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 AC006435.5-201ENST00000624486 112 ntBASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CTDP1Q9Y5B0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-151P-201ENST00000364158 107 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 SNORD113-1-201ENST00000365321 69 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-1323P-201ENST00000384025 107 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 MIR548I2-201ENST00000408348 149 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-383P-201ENST00000410864 94 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AL121914.1-201ENST00000450188 156 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AL137159.1-201ENST00000452808 512 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AC010531.2-201ENST00000465012 153 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 UBL5P3-201ENST00000475112 231 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RPS27P22-201ENST00000478056 241 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RPL36AP21-201ENST00000490372 323 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AC107027.2-201ENST00000512197 115 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-63P-201ENST00000516690 95 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU7-193P-201ENST00000516723 65 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU7-116P-201ENST00000516940 62 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 SNORA48.11-201ENST00000517015 89 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AP003357.1-201ENST00000604497 148 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.778-201ENST00000620203 90 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CTDP1Q9Y5B0 RNU4-13P-201ENST00000364019 141 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.215-201ENST00000364204 112 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 MT-TT-201ENST00000387460 66 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 AC016909.1-201ENST00000415916 166 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 RPS15AP28-201ENST00000435088 386 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 RPL23AP54-201ENST00000495129 419 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 SNORA4.4-201ENST00000515921 135 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-991P-201ENST00000516168 107 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 SNORD116-25-201ENST00000516517 92 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 AC127455.1-201ENST00000565496 145 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 AL355297.2-201ENST00000604792 129 ntBASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CTDP1Q9Y5B0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CTDP1Q9Y5B0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 Y_RNA.497-201ENST00000384447 98 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-1228P-201ENST00000391014 107 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 AL606845.1-201ENST00000404881 255 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 AL357134.1-201ENST00000445848 426 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 IGKV3-31-201ENST00000523109 329 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 MIR5007-201ENST00000583098 95 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 AC091895.1-201ENST00000624494 256 ntBASIC2.65□□□□□ -1.99
CTDP1Q9Y5B0 CENPCP1-201ENST00000533085 2578 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-131P-201ENST00000391144 107 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 RNA5SP511-201ENST00000410487 115 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 AC006461.1-201ENST00000412637 326 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 AC123900.1-201ENST00000420390 96 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 MTCO1P44-201ENST00000441935 243 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 AC093259.1-201ENST00000509755 300 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 RNU7-121P-201ENST00000516604 62 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 RNA5SP137-201ENST00000516833 135 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CTDP1Q9Y5B0 AC008555.8-201ENST00000623602 2168 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 Y_RNA.291-201ENST00000364886 113 ntBASIC2.63□□□□□ -1.99
CTDP1Q9Y5B0 RNU6-728P-201ENST00000365375 104 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms