Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.713-201ENST00000517013 96 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR4709-201ENST00000577272 72 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR5701-3-201ENST00000578890 82 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR3937-201ENST00000580135 106 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR5701-1-201ENST00000585138 82 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 AL513534.2-201ENST00000603836 250 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 MIR5701-2-201ENST00000615634 82 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 uc_338.22-201ENST00000622722 187 ntBASIC0.84□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.58-201ENST00000362807 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.67-201ENST00000362870 100 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.85-201ENST00000363014 111 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.124-201ENST00000363339 93 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.154-201ENST00000363624 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNY3P1-201ENST00000365085 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNY3-201ENST00000365484 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.419-201ENST00000384041 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.485-201ENST00000384395 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.645-201ENST00000391229 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 AL606517.2-201ENST00000442855 241 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 U8.22-201ENST00000459141 133 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNU7-34P-201ENST00000459394 64 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNU7-172P-201ENST00000517125 64 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.83□□□□□ -2.28
SHANK1Q9Y566 AL512605.2-201ENST00000592972 256 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 AC138305.3-201ENST00000624988 240 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.197-201ENST00000364004 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.368-201ENST00000365547 113 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 SNORD42.2-201ENST00000365570 69 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.431-201ENST00000384086 102 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 MIR30A-201ENST00000385092 71 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 RNA5SP127-201ENST00000411051 133 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 AL390729.2-201ENST00000416137 156 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 C8orf59P2-201ENST00000603441 271 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 AC010205.1-201ENST00000616668 449 ntBASIC0.83□□□□□ -2.28
SHANK1Q9Y566 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SHANK1Q9Y566 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
SHANK1Q9Y566 MIRLET7C-201ENST00000362160 84 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 SNORD1A-201ENST00000364968 72 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 SNORA4.2-201ENST00000365313 147 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 RNU6-117P-201ENST00000365415 107 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 RNU6-296P-201ENST00000384608 107 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 RAB28P5-201ENST00000427490 651 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.632-201ENST00000459189 102 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.82□□□□□ -2.28
SHANK1Q9Y566 RNU6-1012P-201ENST00000516606 109 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 AC104695.3-201ENST00000604052 296 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 AC240442.1-201ENST00000616055 283 ntBASIC0.82□□□□□ -2.28
SHANK1Q9Y566 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
SHANK1Q9Y566 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
SHANK1Q9Y566 SNORA12.1-201ENST00000390873 148 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNU6-1009P-201ENST00000390996 107 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNA5SP482-201ENST00000391269 118 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 AL355796.1-201ENST00000406706 323 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.605-201ENST00000410577 105 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNU5A-5P-201ENST00000411054 116 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNU6-1054P-201ENST00000411293 104 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 MRPS18CP6-201ENST00000423587 223 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 MTND1P14-201ENST00000427400 950 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RPL30P15-201ENST00000457129 321 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 AL117351.2-201ENST00000513571 157 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.81□□□□□ -2.28
SHANK1Q9Y566 MIR338-201ENST00000636369 67 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 SNORD68-201ENST00000363214 84 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNU6-271P-201ENST00000363858 105 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RPL30P13-201ENST00000418873 348 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNA5SP57-201ENST00000459463 123 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 OR9P1P-201ENST00000496431 281 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.715-201ENST00000517082 110 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RPL21P9-201ENST00000556149 474 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 AC005972.2-201ENST00000604690 348 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 AL513423.1-201ENST00000621695 132 ntBASIC0.81□□□□□ -2.28
SHANK1Q9Y566 RNU6-1301P-201ENST00000362724 104 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.265-201ENST00000364677 108 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6-867P-201ENST00000364956 107 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.329-201ENST00000365209 107 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6-338P-201ENST00000383888 105 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 SNORA20B-201ENST00000384220 132 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.527-201ENST00000384573 102 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6-308P-201ENST00000390957 107 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AL031003.1-201ENST00000404229 172 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6-130P-201ENST00000411112 103 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC022028.1-201ENST00000412054 408 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RPEP5-201ENST00000441137 268 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC005908.1-201ENST00000468701 347 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC091179.3-201ENST00000474761 144 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RNU6-475P-201ENST00000516073 104 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 RAB11AP2-201ENST00000545905 639 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC125232.2-201ENST00000592457 143 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 AC005014.2-201ENST00000607795 599 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 U6.115-201ENST00000636045 103 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.8□□□□□ -2.28
SHANK1Q9Y566 SNORD14.1-201ENST00000365609 90 ntBASIC0.8□□□□□ -2.28
SHANK1Q9Y566 Y_RNA.518-201ENST00000384552 113 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms