Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNU6-624P-201ENST00000363411 107 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 RNU1-13P-201ENST00000384499 162 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 MIR515-2-201ENST00000384883 83 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 MIR515-1-201ENST00000384884 83 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 RNU7-28P-201ENST00000516759 62 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 AC024995.1-201ENST00000523014 93 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 AC091167.4-201ENST00000605079 184 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 CR392039.5-201ENST00000623201 510 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 RNA5SP196-201ENST00000625967 102 ntBASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS9D1Q9Y2B5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 AC008163.1-202ENST00000636004 2889 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RNU1-105P-201ENST00000363470 161 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MIR206-201ENST00000384872 86 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MIR134-201ENST00000385258 73 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MIR199A2-201ENST00000385289 110 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-519P-201ENST00000410590 108 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RN7SKP192-201ENST00000411291 327 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 SPINT5P-201ENST00000448174 155 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 SCARNA18B-201ENST00000458806 135 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 AL163195.1-201ENST00000496941 348 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-917P-201ENST00000516294 104 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MIR2114-201ENST00000516645 80 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 RNU7-181P-201ENST00000517234 74 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 YPEL5P3-201ENST00000547227 352 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 AC110741.2-201ENST00000605278 268 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MIR486-1-201ENST00000612171 68 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 SNORD3E-202ENST00000627253 216 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 MFSD8-233ENST00000641482 4860 ntBASIC3.88□□□□□ -1.79
VPS9D1Q9Y2B5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 MIR372-201ENST00000362225 67 ntBASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 RNA5SP252-201ENST00000391131 119 ntBASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 RNU2-63P-201ENST00000410792 194 ntBASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-826P-201ENST00000516827 104 ntBASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS9D1Q9Y2B5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 Y_RNA.168-201ENST00000363740 102 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-1307P-201ENST00000391012 103 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 SNORA26.6-201ENST00000391256 115 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 MTND4LP19-201ENST00000403051 166 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 RNA5SP309-201ENST00000516670 106 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-1015P-201ENST00000517121 99 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 AC007536.1-201ENST00000533382 349 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 DNAJC19P9-201ENST00000555084 351 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 MIR6867-201ENST00000610636 67 ntBASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS9D1Q9Y2B5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 MIRLET7A1-201ENST00000362295 80 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 Y_RNA.205-201ENST00000364128 113 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 SNORA70.7-201ENST00000384159 133 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-163P-201ENST00000384396 106 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 SNORA31.1-201ENST00000515993 133 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 SNORA31.5-201ENST00000516190 133 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 SNORA70.14-201ENST00000516205 110 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 RNU7-53P-201ENST00000516705 60 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-557P-201ENST00000516842 110 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 MIR2116-201ENST00000517221 80 ntBASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS9D1Q9Y2B5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 RNU6-480P-201ENST00000384332 107 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 MIR181B2-201ENST00000385004 89 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 RNU2-59P-201ENST00000410482 191 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 TRBV12-1-201ENST00000479785 344 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 AL137849.1-201ENST00000604767 169 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 MIR6717-201ENST00000622747 73 ntBASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS9D1Q9Y2B5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS9D1Q9Y2B5 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS9D1Q9Y2B5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS9D1Q9Y2B5 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms