Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 MIR515-1-201ENST00000384884 83 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 MIR548A2-201ENST00000384956 97 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 MIR522-201ENST00000385071 87 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 MIR1262-201ENST00000408276 93 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 EEF1A1P41-201ENST00000414667 207 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 FTH1P12-201ENST00000432137 551 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.45□□□□□ -1.86
NOD1Q9Y239 AC009238.1-201ENST00000442165 424 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 AC009237.6-201ENST00000446969 424 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 IGKV1-22-201ENST00000524313 326 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NOD1Q9Y239 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.45□□□□□ -1.86
NOD1Q9Y239 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NOD1Q9Y239 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NOD1Q9Y239 AC092435.3-201ENST00000565538 3654 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 RNU6-1298P-201ENST00000362456 101 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 MIR802-201ENST00000390235 94 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 SNORD77.3-201ENST00000391113 65 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 MIR1263-201ENST00000408324 86 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 RN7SKP220-201ENST00000410611 288 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.44□□□□□ -1.86
NOD1Q9Y239 AL163195.1-201ENST00000496941 348 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 RNU6-1149P-201ENST00000516810 97 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 RN7SKP282-201ENST00000516824 299 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 NDUFB9P3-201ENST00000521269 501 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
NOD1Q9Y239 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NOD1Q9Y239 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.44□□□□□ -1.86
NOD1Q9Y239 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NOD1Q9Y239 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NOD1Q9Y239 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NOD1Q9Y239 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.43□□□□□ -1.86
NOD1Q9Y239 RNU6-880P-201ENST00000384526 107 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 SNORD67-201ENST00000390833 111 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 RHEBP3-201ENST00000411920 351 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 MIR2276-201ENST00000516886 89 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
NOD1Q9Y239 AC024995.1-201ENST00000523014 93 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 AC007536.1-201ENST00000533382 349 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 AC091544.4-201ENST00000555268 342 ntBASIC3.43□□□□□ -1.86
NOD1Q9Y239 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NOD1Q9Y239 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NOD1Q9Y239 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NOD1Q9Y239 RNU6-862P-201ENST00000362804 105 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 SNORD68-201ENST00000363214 84 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 MIR518F-201ENST00000384973 87 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 CST2P1-201ENST00000425770 87 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 AC104332.2-201ENST00000429959 156 ntBASIC3.42□□□□□ -1.86
NOD1Q9Y239 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.42□□□□□ -1.86
NOD1Q9Y239 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NOD1Q9Y239 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.41□□□□□ -1.86
NOD1Q9Y239 AC008555.8-201ENST00000623602 2168 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 SNORA54-201ENST00000384281 123 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 AC007064.1-201ENST00000412238 351 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 TRIAP1P1-201ENST00000427062 225 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 TRBV12-1-201ENST00000479785 344 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 GTF3AP2-201ENST00000557014 266 ntBASIC3.41□□□□□ -1.86
NOD1Q9Y239 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
NOD1Q9Y239 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NOD1Q9Y239 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NOD1Q9Y239 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NOD1Q9Y239 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
NOD1Q9Y239 SNORA26.7-201ENST00000391288 122 ntBASIC3.4□□□□□ -1.87
NOD1Q9Y239 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 RNU6-113P-201ENST00000516653 101 ntBASIC3.4□□□□□ -1.87
NOD1Q9Y239 SCARNA15-202ENST00000516881 127 ntBASIC3.4□□□□□ -1.87
NOD1Q9Y239 RNA5SP170-201ENST00000517150 101 ntBASIC3.4□□□□□ -1.87
NOD1Q9Y239 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.4□□□□□ -1.87
NOD1Q9Y239 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 RNA5SP493-201ENST00000364115 91 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 Y_RNA.528-201ENST00000384575 108 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 MIR627-201ENST00000384979 97 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 AL445687.1-201ENST00000439946 251 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 RNA5SP356-201ENST00000515972 94 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 RNA5SP367-201ENST00000516557 118 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 MIR4672-201ENST00000583126 81 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 ELOCP29-201ENST00000588193 334 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 U4atac.1-201ENST00000618345 95 ntBASIC3.39□□□□□ -1.87
NOD1Q9Y239 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
NOD1Q9Y239 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.39□□□□□ -1.87
NOD1Q9Y239 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NOD1Q9Y239 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NOD1Q9Y239 RNU6-1084P-201ENST00000362498 107 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 Y_RNA.43-201ENST00000362670 111 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 SNORD14E-201ENST00000364009 85 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 Z98941.1-201ENST00000407764 100 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 MIR548O-201ENST00000408583 114 ntBASIC3.38□□□□□ -1.87
NOD1Q9Y239 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.38□□□□□ -1.87
NOD1Q9Y239 MIR5197-201ENST00000583721 112 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms