Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC010409.1-201ENST00000487382 476 ntBASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 RNU6-191P-201ENST00000516295 94 ntBASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 AC024995.1-201ENST00000523014 93 ntBASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 AC012433.1-201ENST00000588916 398 ntBASIC2.83□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.44-201ENST00000362676 108 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNU6-862P-201ENST00000362804 105 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNU1-96P-201ENST00000364163 162 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.341-201ENST00000365341 102 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.456-201ENST00000384232 111 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.478-201ENST00000384358 107 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.562-201ENST00000384695 113 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNA5SP323-201ENST00000391094 133 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNU6-855P-201ENST00000410395 104 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 AC091959.1-201ENST00000495857 238 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 AC097462.1-201ENST00000514125 324 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 SNORA27.4-201ENST00000516650 95 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNU1-142P-201ENST00000516682 145 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNA5SP364-201ENST00000516938 78 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RNU7-172P-201ENST00000517125 64 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 RPL21P9-201ENST00000556149 474 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 AC006006.1-201ENST00000603082 144 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 U2.14-201ENST00000615943 113 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.82□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.188-201ENST00000363952 111 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 AL117342.1-201ENST00000404861 406 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 BTF3P4-201ENST00000418852 495 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 RNU7-99P-201ENST00000516271 62 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 RNVU1-2-201ENST00000516326 135 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 RNU6-1337P-201ENST00000516525 95 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.81□□□□□ -1.96
CDK11AQ9UQ88 UBE2WP1-201ENST00000362030 340 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 RNU6-661P-201ENST00000362409 107 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 RNU1-22P-201ENST00000363334 158 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.368-201ENST00000365547 113 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.489-201ENST00000384410 101 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 MT-TG-201ENST00000387429 68 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 RNU6-1186P-201ENST00000410429 97 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 MIR4448-201ENST00000584360 86 ntBASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.307-201ENST00000365022 117 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 RNA5SP467-201ENST00000391274 118 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 EBAG9P1-201ENST00000418955 543 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 AC136628.3-201ENST00000521868 290 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 AC069114.2-201ENST00000604699 304 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 MIR8081-201ENST00000611533 95 ntBASIC2.79□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.416-201ENST00000384014 113 ntBASIC2.78□□□□□ -1.96
CDK11AQ9UQ88 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.78□□□□□ -1.96
CDK11AQ9UQ88 RPL36AP21-201ENST00000490372 323 ntBASIC2.78□□□□□ -1.96
CDK11AQ9UQ88 RNU6-1271P-201ENST00000517049 105 ntBASIC2.78□□□□□ -1.96
CDK11AQ9UQ88 MIR4781-201ENST00000585250 76 ntBASIC2.78□□□□□ -1.96
CDK11AQ9UQ88 Y_RNA.54-201ENST00000362766 105 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.275-201ENST00000364726 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 SNORA20.1-201ENST00000364790 130 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.447-201ENST00000384184 113 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 RNU6-376P-201ENST00000384731 106 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 RNA5SP100-201ENST00000410903 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 RNA5SP59-201ENST00000410922 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 RNU6-1023P-201ENST00000516137 106 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 SNORA44.1-201ENST00000517031 108 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 MIR3935-201ENST00000583472 104 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 AC010900.2-201ENST00000604508 210 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 MIR502-201ENST00000606349 86 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 BX284668.6-201ENST00000606899 438 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 AC103810.8-201ENST00000607347 118 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.77□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.226-201ENST00000364337 114 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 RNU6-1019P-201ENST00000364424 107 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.310-201ENST00000365063 113 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AL603910.2-201ENST00000407268 136 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AP1B1P2-201ENST00000416196 106 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AC099677.2-201ENST00000436385 175 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AC069257.2-201ENST00000441819 155 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 RNU7-94P-201ENST00000459576 63 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 MIR3198-2-201ENST00000577868 80 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.76□□□□□ -1.97
CDK11AQ9UQ88 RNU4-13P-201ENST00000364019 141 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 RNU6-117P-201ENST00000365415 107 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 Y_RNA.476-201ENST00000384347 108 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 RNU4-62P-201ENST00000410125 130 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 RNU6-321P-201ENST00000410912 106 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 RPS20P10-201ENST00000451209 253 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 MIR5094-201ENST00000578766 85 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 MIR3128-201ENST00000581957 66 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AL162424.1-201ENST00000602325 221 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AC005972.2-201ENST00000604690 348 ntBASIC2.75□□□□□ -1.97
CDK11AQ9UQ88 AL078604.3-201ENST00000615580 211 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms