Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 RNU4-1-201ENST00000363925 141 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 Y_RNA.537-201ENST00000384626 109 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 FCF1P9-201ENST00000412546 282 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 MTCO2P11-201ENST00000431069 680 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 SCARNA18-201ENST00000459004 134 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 AC107297.1-201ENST00000459991 176 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 AC138749.4-201ENST00000563970 127 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1□□□□□ -2.57
SHANK2Q9UPX8 AC245008.1-201ENST00000608123 476 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 AC022306.2-201ENST00000617563 647 ntBASIC-1□□□□□ -2.57
SHANK2Q9UPX8 MIR518F-201ENST00000384973 87 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 AC137499.1-201ENST00000427602 88 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 RPL22P17-201ENST00000438729 315 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 AC018710.1-201ENST00000506509 158 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 AC010486.3-201ENST00000511602 785 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 RNU6-612P-201ENST00000516909 102 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 MIR5706-201ENST00000579841 80 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 AC244669.1-204ENST00000621564 178 ntBASIC-1.01□□□□□ -2.57
SHANK2Q9UPX8 Y_RNA.621-201ENST00000411065 96 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 MTND3P9-201ENST00000429526 346 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC010587.1-201ENST00000505809 469 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 RNA5SP461-201ENST00000516451 104 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC022784.5-201ENST00000522241 437 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 MTATP6P15-201ENST00000527233 835 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 MTND4P33-201ENST00000556706 766 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 MIR3165-201ENST00000579874 75 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 FGF7P1-201ENST00000582820 288 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 BNIP3P39-201ENST00000601077 554 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC018462.2-201ENST00000605375 395 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 AC006386.1-201ENST00000619436 415 ntBASIC-1.02□□□□□ -2.57
SHANK2Q9UPX8 RNU6-227P-201ENST00000362865 103 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 RNU7-73P-201ENST00000458743 63 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 RPL23AP75-201ENST00000491601 451 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 SNORA25.14-201ENST00000516481 132 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 AC105029.1-201ENST00000520250 669 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 AC068880.4-201ENST00000623082 495 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 AC022418.1-201ENST00000624118 445 ntBASIC-1.03□□□□□ -2.57
SHANK2Q9UPX8 MIR101-2-201ENST00000362195 79 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 RNU6-245P-201ENST00000384020 107 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 RNU6-855P-201ENST00000410395 104 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 AC116353.3-201ENST00000511215 249 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 MIR378D2-201ENST00000580636 98 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 MIR4791-201ENST00000607666 84 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 MIR8066-201ENST00000617280 78 ntBASIC-1.04□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNY4P27-201ENST00000363341 96 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.184-201ENST00000363884 108 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-266P-201ENST00000364225 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 ELOCP4-201ENST00000420090 333 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 MTCO2P27-201ENST00000420740 428 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AL137792.2-201ENST00000443484 235 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC093303.1-201ENST00000514549 295 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNA5SP169-201ENST00000517268 117 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC091144.1-201ENST00000519573 138 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 MIR4639-201ENST00000584938 69 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 U7.6-201ENST00000610841 64 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC009159.2-201ENST00000617603 606 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC105081.1-201ENST00000617727 106 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 SNORA27.1-201ENST00000362604 124 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNA5SP192-201ENST00000364404 120 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 SNORA63C-201ENST00000364578 129 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 SNORD50B-201ENST00000364995 70 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-117P-201ENST00000365415 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 MIR522-201ENST00000385071 87 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 MTCO3P40-201ENST00000392516 676 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-329P-201ENST00000459618 107 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 SNORA27.4-201ENST00000516650 95 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 RNU6-135P-201ENST00000516769 101 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 MTND1P35-201ENST00000526739 508 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC125232.2-201ENST00000592457 143 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC069431.2-201ENST00000604149 1099 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC127459.3-201ENST00000624328 466 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 AC013437.2-201ENST00000639587 677 ntBASIC-1.05□□□□□ -2.58
SHANK2Q9UPX8 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.06□□□□□ -2.58
SHANK2Q9UPX8 RNU6-809P-201ENST00000384461 107 ntBASIC-1.06□□□□□ -2.58
SHANK2Q9UPX8 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms