Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDZRN3Q9UPQ7 RNU6-661P-201ENST00000362409 107 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 RNU1-70P-201ENST00000362618 164 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD115-19-201ENST00000363098 82 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD115-18-201ENST00000363293 82 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 RNU4-67P-201ENST00000364569 141 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 SNORD115-17-201ENST00000364612 82 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 SNORA2.2-201ENST00000365473 135 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 RNU7-57P-201ENST00000459540 60 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 RNU1-143P-201ENST00000516296 146 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 AC021739.1-201ENST00000559631 174 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 U1.23-201ENST00000610293 146 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 RNU1-68P-201ENST00000615382 146 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 U1.39-201ENST00000621562 146 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 AC000403.1-201ENST00000613696 3585 ntBASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDZRN3Q9UPQ7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 SNORA44-201ENST00000384584 132 ntBASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 snoU13.14-201ENST00000459372 104 ntBASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDZRN3Q9UPQ7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
PDZRN3Q9UPQ7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PDZRN3Q9UPQ7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PDZRN3Q9UPQ7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 SNORD56.3-201ENST00000363507 71 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 Y_RNA.377-201ENST00000365644 108 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 Y_RNA.430-201ENST00000384081 110 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-679P-201ENST00000391003 106 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 SNRPGP13-201ENST00000442212 177 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RNU1-131P-201ENST00000458943 161 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RN7SL429P-201ENST00000479090 223 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RN7SL489P-201ENST00000486185 223 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RN7SL327P-201ENST00000488659 223 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RPS29P20-201ENST00000489592 171 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 AC093259.1-201ENST00000509755 300 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA64.4-201ENST00000516632 81 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 HSPE1P18-201ENST00000517602 280 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 MIR3186-201ENST00000577404 85 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 MIR3683-201ENST00000580847 82 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RPS15AP11-201ENST00000594193 385 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 RN7SL853P-201ENST00000617250 223 ntBASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.15□□□□□ -1.75
PDZRN3Q9UPQ7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 RNU2-49P-201ENST00000410666 184 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-221P-201ENST00000459541 99 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 MIR3117-201ENST00000584034 78 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 RPL12P50-201ENST00000603116 116 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 AC064859.1-201ENST00000624741 174 ntBASIC4.14□□□□□ -1.75
PDZRN3Q9UPQ7 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 U8.15-201ENST00000390947 134 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 SNORA12-201ENST00000391162 147 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 RPS3P1-201ENST00000456781 192 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 AC091544.4-201ENST00000555268 342 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 MIR4672-201ENST00000583126 81 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 ELOCP29-201ENST00000588193 334 ntBASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDZRN3Q9UPQ7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-524P-201ENST00000384270 107 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 MTND4LP19-201ENST00000403051 166 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AL133475.1-201ENST00000404414 305 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 RN7SL863P-201ENST00000462370 296 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AC006023.1-201ENST00000603944 259 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AC022217.4-201ENST00000604389 163 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 AL110115.1-201ENST00000614396 364 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 Y_RNA.788-201ENST00000622394 112 ntBASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDZRN3Q9UPQ7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 RNU6-743P-201ENST00000364151 106 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 SNORD115-27-201ENST00000364430 82 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 Y_RNA.410-201ENST00000383992 113 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 RNA5SP293-201ENST00000410527 113 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 RNA5SP229-201ENST00000410809 99 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 AL513534.2-201ENST00000603836 250 ntBASIC4.11□□□□□ -1.75
PDZRN3Q9UPQ7 uc_338.1-201ENST00000612113 180 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms