Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNY1P1-201ENST00000364372 112 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.323-201ENST00000365157 109 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.540-201ENST00000384638 111 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 SNORA79-201ENST00000408376 140 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 CYCSP48-201ENST00000417124 323 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 AC108667.1-201ENST00000428618 249 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 snoU13.28-201ENST00000459235 104 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 AC091179.3-201ENST00000474761 144 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 MRPS36P2-201ENST00000512569 299 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 AL022345.2-201ENST00000606307 135 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 MIR6845-201ENST00000613182 61 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 MIR2052-201ENST00000636055 55 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 WWP1P1-201ENST00000466609 2769 ntBASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL17A1Q9UMD9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.73-201ENST00000362910 113 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.313-201ENST00000365095 103 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 AL031003.1-201ENST00000404229 172 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 RNU6-855P-201ENST00000410395 104 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 RNU6-295P-201ENST00000516901 104 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 snoU13.31-201ENST00000607291 104 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 IGLL4P-201ENST00000614590 133 ntBASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL17A1Q9UMD9 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.49-201ENST00000362714 112 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 SNORA26.9-201ENST00000391322 122 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 AP000705.1-201ENST00000454567 350 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 HMGN2P16-201ENST00000456802 261 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 HMGN2P15-201ENST00000585707 270 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 AC099778.2-201ENST00000610904 211 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.818-201ENST00000618813 71 ntBASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
COL17A1Q9UMD9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-776P-201ENST00000364403 104 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-1022P-201ENST00000365049 104 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 Y_RNA.310-201ENST00000365063 113 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-242P-201ENST00000384359 107 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 MIR570-201ENST00000384917 97 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 MIR147B-201ENST00000390185 80 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 HSPE1P26-201ENST00000405341 275 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-893P-201ENST00000458841 100 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 SNORA31.16-201ENST00000516773 139 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-158P-201ENST00000517104 100 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 RNU6-144P-201ENST00000383951 107 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 MIR4662A-201ENST00000637499 67 ntBASIC3.67□□□□□ -1.82
COL17A1Q9UMD9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 SNORD115-30-201ENST00000364117 82 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AL023284.1-201ENST00000403956 276 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 RNU2-37P-201ENST00000410695 177 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 CALM2P4-201ENST00000430810 426 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 RPL39P40-201ENST00000445481 146 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AL021397.1-201ENST00000451806 248 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 RNU2-13P-201ENST00000515909 113 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 HSPE1P18-201ENST00000517602 280 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AC019288.1-201ENST00000557918 224 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AC107294.3-201ENST00000609211 526 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AL138880.2-201ENST00000616214 239 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.66□□□□□ -1.82
COL17A1Q9UMD9 AC002546.1-201ENST00000588041 2504 ntBASIC3.65□□□□□ -1.82
COL17A1Q9UMD9 AC009487.2-201ENST00000420969 6821 ntBASIC3.65□□□□□ -1.82
COL17A1Q9UMD9 AL589743.1-201ENST00000551932 2712 ntBASIC3.65□□□□□ -1.82
COL17A1Q9UMD9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
COL17A1Q9UMD9 SNORA51.4-201ENST00000364993 124 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 MIR7-2-201ENST00000384970 110 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 Y_RNA.587-201ENST00000391210 103 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 AC009969.1-201ENST00000438726 172 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 RNU6-107P-201ENST00000516643 102 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 RNU6-197P-201ENST00000516680 100 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 HSPE1P7-201ENST00000604681 321 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 AL034555.1-201ENST00000604816 211 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 MIR1291-201ENST00000627649 87 ntBASIC3.65□□□□□ -1.83
COL17A1Q9UMD9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 RNU6-24P-201ENST00000384440 107 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 MIR499A-201ENST00000384903 122 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 MIR1278-201ENST00000408753 81 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 RNU7-23P-201ENST00000459465 62 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 AC141557.1-201ENST00000540982 400 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 RPS15AP11-201ENST00000594193 385 ntBASIC3.64□□□□□ -1.83
COL17A1Q9UMD9 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms