Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-1143P-201ENST00000516125 104 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 RNU7-110P-201ENST00000516891 62 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 RNU6-570P-201ENST00000517051 105 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 MIR502-201ENST00000606349 86 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 AC011373.1-201ENST00000607270 237 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 AP001282.2-201ENST00000616149 309 ntBASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.7□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.193-201ENST00000363979 102 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.331-201ENST00000365267 102 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 RNU6-463P-201ENST00000384340 107 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 MIR194-1-201ENST00000384892 85 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 MIR562-201ENST00000384894 95 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 MIR1261-201ENST00000408659 82 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1203P-201ENST00000410703 110 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AL390729.2-201ENST00000416137 156 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 HSPE1P24-201ENST00000450782 238 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 HSPE1P13-201ENST00000451143 297 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AC005042.3-201ENST00000453230 174 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 snoU13.15-201ENST00000459407 104 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 snoU13.26-201ENST00000459452 105 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 RNU6-63P-201ENST00000516690 95 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 RNU6-295P-201ENST00000516901 104 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AC091178.2-201ENST00000584401 117 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AC021506.2-201ENST00000612354 169 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 7SK.10-201ENST00000621414 298 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 ICE2P2-201ENST00000483823 2787 ntBASIC1.69□□□□□ -2.14
LIMA1Q9UHB6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.418-201ENST00000384029 102 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU6-196P-201ENST00000384315 107 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU6-713P-201ENST00000384761 107 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU2-61P-201ENST00000411069 191 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU6-436P-201ENST00000516171 114 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1337P-201ENST00000516525 95 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 RNU6-341P-201ENST00000516973 96 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 MIR3145-201ENST00000580727 82 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 SNORD113-5-201ENST00000607261 78 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 MIR8063-201ENST00000621930 81 ntBASIC1.68□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 RNU6-290P-201ENST00000365212 101 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.452-201ENST00000384202 108 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 RNU6-21P-201ENST00000384710 107 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 SNORA12.1-201ENST00000390873 148 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 AL034345.1-201ENST00000407768 123 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 AC004965.1-201ENST00000413033 213 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 SEPT14P8-201ENST00000508026 178 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
LIMA1Q9UHB6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR302D-201ENST00000362275 68 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1123P-201ENST00000362347 106 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU4-90P-201ENST00000362773 141 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 Y_RNA.329-201ENST00000365209 107 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU6-136P-201ENST00000384663 107 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR520G-201ENST00000385064 90 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR504-201ENST00000385065 83 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR1304-201ENST00000408243 91 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RPL23AP36-201ENST00000413895 458 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 AL135790.2-201ENST00000437701 267 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 TRBVB-201ENST00000477100 408 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1338P-201ENST00000516328 91 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU2-56P-201ENST00000516826 190 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 AP002004.2-201ENST00000531656 154 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR3683-201ENST00000580847 82 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR4285-201ENST00000581001 85 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 MIR3149-201ENST00000584629 83 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 AL162424.1-201ENST00000602325 221 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 DEFB117-201ENST00000602356 141 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LIMA1Q9UHB6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
LIMA1Q9UHB6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 MIR126-201ENST00000362291 85 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 SNORA1B-201ENST00000362535 133 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 Y_RNA.383-201ENST00000383855 97 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 MIR1289-2-201ENST00000408360 111 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 RNU2-38P-201ENST00000410856 79 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 MTND1P19-201ENST00000511780 315 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 AC015720.1-201ENST00000565251 277 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 SNORA28-201ENST00000606769 126 ntBASIC1.65□□□□□ -2.15
LIMA1Q9UHB6 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms