Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 AC240442.1-201ENST00000616055 283 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 U2.1-201ENST00000618978 145 ntBASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.85□□□□□ -2.27
CLCF1Q9UBD9 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU6-833P-201ENST00000363486 107 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.259-201ENST00000364619 101 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU6-163P-201ENST00000384396 106 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1105P-201ENST00000384774 107 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU6-910P-201ENST00000390844 107 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.621-201ENST00000411065 96 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 AC245047.7-201ENST00000440265 293 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 AC048334.1-201ENST00000477975 159 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 CYCTP-201ENST00000504253 315 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 RNU6-1012P-201ENST00000516606 109 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 AC055872.1-201ENST00000570978 278 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 AC120024.3-201ENST00000603167 156 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 MIR6857-201ENST00000613267 93 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 AC027279.3-201ENST00000625055 122 ntBASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.84□□□□□ -2.27
CLCF1Q9UBD9 Y_RNA.101-201ENST00000363154 102 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RNU6-626P-201ENST00000363354 107 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.142-201ENST00000363491 102 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RNY3P11-201ENST00000364153 102 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.384-201ENST00000383909 102 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RNU6-20P-201ENST00000384106 107 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 MRPS18CP6-201ENST00000423587 223 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RBMX2P4-201ENST00000441256 376 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RPS4XP11-201ENST00000446897 772 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 LINC01399-202ENST00000458450 244 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 RPS29P1-201ENST00000465274 159 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 AC022616.4-201ENST00000522985 181 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 MIR4659A-201ENST00000580269 81 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 AC211469.2-201ENST00000605461 205 ntBASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.27-201ENST00000362540 103 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 SNORD68-201ENST00000363214 84 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 RNU6-324P-201ENST00000363957 106 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.796-201ENST00000364268 102 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.230-201ENST00000364348 109 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.799-201ENST00000364992 102 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 RNY1P14-201ENST00000384426 108 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.508-201ENST00000384502 114 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 SNORD12-201ENST00000391002 90 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 RNU6-1116P-201ENST00000517269 99 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
CLCF1Q9UBD9 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.269-201ENST00000364685 89 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 RNU6-1187P-201ENST00000364771 110 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.446-201ENST00000384178 104 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 MIR19B1-201ENST00000384829 87 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 MIR559-201ENST00000385188 96 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 RNU2-61P-201ENST00000411069 191 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 RPEP5-201ENST00000441137 268 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 U8.19-201ENST00000459095 133 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 RNU6-155P-201ENST00000516347 100 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 AC011604.1-201ENST00000545978 196 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 UBE2V2P2-201ENST00000587677 504 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 VN1R91P-201ENST00000594377 169 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 AC138305.3-201ENST00000624988 240 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 MTND4LP32-201ENST00000636111 270 ntBASIC0.81□□□□□ -2.28
CLCF1Q9UBD9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 U8.5-201ENST00000364528 136 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 RNU6-1040P-201ENST00000383974 107 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 SNORD116-13-201ENST00000384408 92 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 SNORA80D-201ENST00000384488 135 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 MIR452-201ENST00000385020 85 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 RNY4P36-201ENST00000391116 96 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 PIGPP3-201ENST00000425307 415 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 CHEK2P4-201ENST00000450340 246 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 SNORD79.1-201ENST00000516069 84 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 RNU6-277P-201ENST00000516272 106 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 RNU6-699P-201ENST00000517081 110 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AC103810.9-201ENST00000606688 112 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AC011476.5-201ENST00000615594 130 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AL591926.4-201ENST00000616895 298 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 MIR6788-201ENST00000618842 66 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 MIR1302-1-201ENST00000637932 143 ntBASIC0.8□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.122-201ENST00000363331 96 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.390-201ENST00000383932 102 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 Y_RNA.428-201ENST00000384078 102 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 MIR526A1-201ENST00000384897 85 ntBASIC0.79□□□□□ -2.28
CLCF1Q9UBD9 RNU6-1199P-201ENST00000411249 104 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms