Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNTN3Q9P232 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CNTN3Q9P232 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CNTN3Q9P232 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNTN3Q9P232 Y_RNA.99-201ENST00000363138 105 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 MIR592-201ENST00000384959 97 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 Y_RNA.630-201ENST00000411370 108 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 EDDM3CP-201ENST00000415977 425 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 AC104389.3-201ENST00000445629 235 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 SNORD33.1-201ENST00000516213 88 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 RNU6-1041P-201ENST00000516254 102 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 AC008507.4-201ENST00000585464 127 ntBASIC3.22□□□□□ -1.89
CNTN3Q9P232 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.22□□□□□ -1.89
CNTN3Q9P232 ZNF271P-202ENST00000465539 1970 ntBASIC3.21□□□□□ -1.89
CNTN3Q9P232 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
CNTN3Q9P232 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.89
CNTN3Q9P232 RNU6-888P-201ENST00000363010 101 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 SNORD116-21-201ENST00000384507 92 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 RNA5SP467-201ENST00000391274 118 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 AC063976.4-201ENST00000421971 163 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 AC018868.1-201ENST00000491307 315 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 RNU6-1291P-201ENST00000516591 104 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 AC024995.1-201ENST00000523014 93 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.21□□□□□ -1.9
CNTN3Q9P232 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
CNTN3Q9P232 MIR3129-201ENST00000581095 76 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 U4atac.1-201ENST00000618345 95 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 AL121890.5-201ENST00000620848 304 ntBASIC3.21□□□□□ -1.9
CNTN3Q9P232 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.9
CNTN3Q9P232 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNTN3Q9P232 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CNTN3Q9P232 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNTN3Q9P232 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CNTN3Q9P232 MIRLET7F2-201ENST00000385277 83 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 RNA5SP274-201ENST00000410484 108 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 EEF1A1P41-201ENST00000414667 207 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 AL021397.1-201ENST00000451806 248 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.2□□□□□ -1.9
CNTN3Q9P232 AL033523.1-201ENST00000605153 153 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 AL136360.1-201ENST00000503377 1900 ntBASIC3.2□□□□□ -1.9
CNTN3Q9P232 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CNTN3Q9P232 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
CNTN3Q9P232 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CNTN3Q9P232 AP006437.1-201ENST00000641440 3685 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA80A-201ENST00000363922 136 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA38-201ENST00000363946 132 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 Y_RNA.267-201ENST00000364679 109 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA25B-201ENST00000365507 128 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA1-201ENST00000384107 130 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORD61-201ENST00000384252 73 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA12.1-201ENST00000390873 148 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 SNORA26.7-201ENST00000391288 122 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTN3Q9P232 COTL1P1-201ENST00000422309 375 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC022018.1-201ENST00000430685 241 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTN3Q9P232 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 RNU6-113P-201ENST00000516653 101 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC107016.2-201ENST00000547968 190 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC025166.1-201ENST00000612411 163 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.19□□□□□ -1.9
CNTN3Q9P232 U6.108-201ENST00000637764 58 ntBASIC3.19□□□□□ -1.9
CNTN3Q9P232 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CNTN3Q9P232 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTN3Q9P232 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
CNTN3Q9P232 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CNTN3Q9P232 MIR126-201ENST00000362291 85 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 RNA5SP323-201ENST00000391094 133 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 FTH1P12-201ENST00000432137 551 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 ATP5J2P3-201ENST00000451550 258 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 RPPH1-2P-201ENST00000516688 293 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 AP002004.2-201ENST00000531656 154 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 MIR4679-2-201ENST00000578358 77 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 AL137790.1-201ENST00000634283 177 ntBASIC3.18□□□□□ -1.9
CNTN3Q9P232 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CNTN3Q9P232 RNU6-508P-201ENST00000363231 103 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 RNA5SP125-201ENST00000364843 120 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 SNORA9.2-201ENST00000365361 133 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 RNU6-160P-201ENST00000384591 107 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 SNORD72-201ENST00000390994 80 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 SNRPGP13-201ENST00000442212 177 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 Y_RNA.651-201ENST00000459380 103 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 AL049830.1-201ENST00000468034 425 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 AC096725.1-201ENST00000514266 313 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 RNU6-781P-201ENST00000516377 101 ntBASIC3.17□□□□□ -1.9
CNTN3Q9P232 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CNTN3Q9P232 MTND5P32-201ENST00000560711 1802 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CNTN3Q9P232 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CNTN3Q9P232 RNU6-880P-201ENST00000384526 107 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 MIR634-201ENST00000385208 97 ntBASIC3.16□□□□□ -1.9
CNTN3Q9P232 CST2P1-201ENST00000425770 87 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms