Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 Y_RNA.621-201ENST00000411065 96 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 COX6CP14-201ENST00000469580 174 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 SNORA70.12-201ENST00000516084 153 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-559P-201ENST00000516151 98 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 RNU7-4P-201ENST00000516961 62 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 AC005176.2-201ENST00000596933 147 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.76□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.253-201ENST00000364562 112 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.390-201ENST00000383932 102 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 SNORD116-29-201ENST00000384516 83 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 MIR516B2-201ENST00000385190 85 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 SNORD78.2-201ENST00000391076 69 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 AC096644.2-201ENST00000429278 159 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 ACA64.5-201ENST00000516207 127 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-155P-201ENST00000516347 100 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 AC144568.1-201ENST00000520139 137 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 MIR4659A-201ENST00000580269 81 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 AC006380.1-201ENST00000603598 186 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 AC113139.1-201ENST00000605049 239 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 U2.1-201ENST00000618978 145 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 MTND4LP32-201ENST00000636111 270 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 U6.92-201ENST00000636464 89 ntBASIC0.75□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.146-201ENST00000363549 102 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 SNORD114-24-201ENST00000365029 72 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 MIR522-201ENST00000385071 87 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 POLR2J4-204ENST00000418424 324 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.653-201ENST00000459091 95 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 AC005840.1-201ENST00000498412 377 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-277P-201ENST00000516272 106 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 SNORA20.3-201ENST00000516880 132 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 AP003716.2-201ENST00000528260 108 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 MIR4661-201ENST00000582720 75 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 AC013244.2-201ENST00000603396 103 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 snoU13.31-201ENST00000607291 104 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 AL355073.2-201ENST00000612106 557 ntBASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
KCNIP1Q9NZI2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 SNORD114-2-201ENST00000363953 78 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-324P-201ENST00000363957 106 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.314-201ENST00000365114 102 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-1105P-201ENST00000384774 107 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 MIR452-201ENST00000385020 85 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 Y_RNA.605-201ENST00000410577 105 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 AC138393.2-201ENST00000414742 246 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 RBMX2P4-201ENST00000441256 376 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-699P-201ENST00000517081 110 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 AC090142.3-201ENST00000519012 385 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.73□□□□□ -2.29
KCNIP1Q9NZI2 AC117470.1-201ENST00000381974 330 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 MIR200A-201ENST00000384875 90 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 RPS20P10-201ENST00000451209 253 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 PRDX4P1-201ENST00000507189 574 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 RNU7-41P-201ENST00000515917 61 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 AC136932.1-201ENST00000574771 208 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 MIR4781-201ENST00000585250 76 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 AC022441.3-201ENST00000605737 136 ntBASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
KCNIP1Q9NZI2 RNA5SP264-201ENST00000363115 107 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 SNORA25.3-201ENST00000363205 127 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.329-201ENST00000365209 107 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 MIR605-201ENST00000385078 83 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 MIR1185-1-201ENST00000408598 86 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 AL390729.2-201ENST00000416137 156 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 MLLT10P1-201ENST00000418346 262 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 AC098614.3-201ENST00000438957 440 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 RNU7-90P-201ENST00000459216 62 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-911P-201ENST00000516523 104 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 SNORD45.4-201ENST00000516629 73 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 SNORA74.3-201ENST00000517108 154 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 AC005972.2-201ENST00000604690 348 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.71□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.27-201ENST00000362540 103 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-490P-201ENST00000362985 107 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.230-201ENST00000364348 109 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 SNORD50B-201ENST00000364995 70 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-53P-201ENST00000365367 106 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 RNU6-1297P-201ENST00000384415 104 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 Y_RNA.570-201ENST00000384750 101 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 AC006461.1-201ENST00000412637 326 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 SNRPGP10-201ENST00000432323 225 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 RBM11P1-201ENST00000604951 799 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 AC211469.2-201ENST00000605461 205 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 AC025253.1-201ENST00000613623 543 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 AC084781.2-201ENST00000615568 161 ntBASIC0.7□□□□□ -2.3
KCNIP1Q9NZI2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms