Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AC136628.3-201ENST00000521868 290 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AC011604.1-201ENST00000545978 196 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.19□□□□□ -2.06
DDX56Q9NY93 AC062037.2-201ENST00000610137 73 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AC021506.2-201ENST00000612354 169 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AL513423.1-201ENST00000621695 132 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 AC068647.2-201ENST00000637380 353 ntBASIC2.19□□□□□ -2.06
DDX56Q9NY93 SNORD33-201ENST00000362761 85 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 RNU6-1048P-201ENST00000364054 107 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.18□□□□□ -2.06
DDX56Q9NY93 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.18□□□□□ -2.06
DDX56Q9NY93 MIR4513-201ENST00000581077 86 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
DDX56Q9NY93 ICE2P2-201ENST00000483823 2787 ntBASIC2.18□□□□□ -2.06
DDX56Q9NY93 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
DDX56Q9NY93 MIR424-201ENST00000362227 98 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 SNORA26.5-201ENST00000391215 123 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 RNU2-14P-201ENST00000411053 191 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC004965.1-201ENST00000413033 213 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 AL356320.1-201ENST00000429616 163 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX56Q9NY93 UBE2DNL-203ENST00000474922 222 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC004817.2-201ENST00000561794 651 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 SNORA77B-201ENST00000578179 125 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC002984.1-201ENST00000591692 448 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.17□□□□□ -2.06
DDX56Q9NY93 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX56Q9NY93 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
DDX56Q9NY93 AC134026.1-201ENST00000623249 2239 ntBASIC2.17□□□□□ -2.06
DDX56Q9NY93 Y_RNA.44-201ENST00000362676 108 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 RNA5SP160-201ENST00000364866 120 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 Y_RNA.477-201ENST00000384352 108 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 RNU6-763P-201ENST00000390865 106 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 AL603910.2-201ENST00000407268 136 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 POLR3GP1-201ENST00000594073 261 ntBASIC2.16□□□□□ -2.06
DDX56Q9NY93 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
DDX56Q9NY93 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
DDX56Q9NY93 UBE2WP1-201ENST00000362030 340 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 Y_RNA.54-201ENST00000362766 105 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 Y_RNA.117-201ENST00000363294 101 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 RNU6-740P-201ENST00000364734 105 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 U8.7-201ENST00000364940 136 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 RNU6-203P-201ENST00000384038 104 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 Y_RNA.562-201ENST00000384695 113 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 AL161935.2-201ENST00000414627 60 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 HSPE1P24-201ENST00000450782 238 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 Y_RNA.637-201ENST00000459424 114 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 RPL39P38-201ENST00000467018 153 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 AC117454.1-201ENST00000491120 168 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 U2.14-201ENST00000615943 113 ntBASIC2.15□□□□□ -2.07
DDX56Q9NY93 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
DDX56Q9NY93 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.217-201ENST00000364214 105 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.275-201ENST00000364726 110 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.307-201ENST00000365022 117 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 SNORA72.4-201ENST00000384174 132 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 RNU6-1289P-201ENST00000384431 106 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 MIR194-1-201ENST00000384892 85 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 RNU6-651P-201ENST00000411040 105 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.641-201ENST00000459414 105 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 AC099513.1-201ENST00000490423 301 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.14□□□□□ -2.07
DDX56Q9NY93 MTND1P19-201ENST00000511780 315 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.680-201ENST00000516441 93 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.714-201ENST00000517065 90 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 MIR4422-201ENST00000581938 83 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 AP003357.1-201ENST00000604497 148 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 MIR8063-201ENST00000621930 81 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 snoU18.1-201ENST00000629629 71 ntBASIC2.14□□□□□ -2.07
DDX56Q9NY93 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
DDX56Q9NY93 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
DDX56Q9NY93 Y_RNA.277-201ENST00000364754 102 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 Y_RNA.350-201ENST00000365409 98 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 Y_RNA.352-201ENST00000365439 102 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
DDX56Q9NY93 MTCO2P33-201ENST00000402100 465 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.13□□□□□ -2.07
DDX56Q9NY93 AC104332.1-201ENST00000440471 797 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 RNU7-141P-201ENST00000459304 62 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 Y_RNA.673-201ENST00000516306 88 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 MIR4643-201ENST00000577473 78 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 MIR3128-201ENST00000581957 66 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 MIR548AY-201ENST00000617669 107 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 SNORD3E-202ENST00000627253 216 ntBASIC2.13□□□□□ -2.07
DDX56Q9NY93 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
DDX56Q9NY93 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNU4-82P-201ENST00000362443 140 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNU6-1272P-201ENST00000362776 107 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNU6-1080P-201ENST00000383982 107 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 Y_RNA.447-201ENST00000384184 113 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 MIR513A1-201ENST00000385138 129 ntBASIC2.12□□□□□ -2.07
DDX56Q9NY93 RNU2-40P-201ENST00000410833 196 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 204.5 ms