Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 RNU6-911P-201ENST00000516523 104 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 RNU6-1012P-201ENST00000516606 109 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 MIR4498-201ENST00000577599 66 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 AC005730.3-201ENST00000583067 366 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 UBE2V2P2-201ENST00000587677 504 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 AC240442.1-201ENST00000616055 283 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 MIR1302-1-201ENST00000637932 143 ntBASIC0.89□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.4-201ENST00000362333 112 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.118-201ENST00000363300 101 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.122-201ENST00000363331 96 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RNU6-626P-201ENST00000363354 107 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RNU6-324P-201ENST00000363957 106 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 SNORA25.9-201ENST00000365087 128 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RNU6-1283P-201ENST00000365314 105 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RNU6-20P-201ENST00000384106 107 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 MIR891A-201ENST00000401237 79 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 MIR1287-201ENST00000408492 90 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AC104332.1-201ENST00000440471 797 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RPS4XP11-201ENST00000446897 772 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.88□□□□□ -2.27
SMPD3Q9NY59 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 RNU6-699P-201ENST00000517081 110 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 MIR4659A-201ENST00000580269 81 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AC211469.2-201ENST00000605461 205 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AL359821.1-201ENST00000605519 182 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 AC011476.5-201ENST00000615594 130 ntBASIC0.88□□□□□ -2.27
SMPD3Q9NY59 SNORD68-201ENST00000363214 84 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RNU6-1040P-201ENST00000383974 107 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RNU6-1080P-201ENST00000383982 107 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RNU6-163P-201ENST00000384396 106 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 SNORD116-29-201ENST00000384516 83 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AC096644.2-201ENST00000429278 159 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AC002429.1-201ENST00000437672 148 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AL603825.1-201ENST00000438481 80 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RPEP5-201ENST00000441137 268 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AC087343.1-201ENST00000477341 475 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 CYCTP-201ENST00000504253 315 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.673-201ENST00000516306 88 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RNU6-155P-201ENST00000516347 100 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.718-201ENST00000517110 102 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 RNU6-1116P-201ENST00000517269 99 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 MIR4781-201ENST00000585250 76 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AC120024.3-201ENST00000603167 156 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AL132765.2-201ENST00000610812 351 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 AC138305.3-201ENST00000624988 240 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 U6.92-201ENST00000636464 89 ntBASIC0.87□□□□□ -2.27
SMPD3Q9NY59 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.87□□□□□ -2.27
SMPD3Q9NY59 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.27-201ENST00000362540 103 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 SNORA72.1-201ENST00000363485 129 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 RNU6-833P-201ENST00000363486 107 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.446-201ENST00000384178 104 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 SNORD116-13-201ENST00000384408 92 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 RNU6-1105P-201ENST00000384774 107 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 MTCO2P27-201ENST00000420740 428 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 CHEK2P4-201ENST00000450340 246 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.86□□□□□ -2.27
SMPD3Q9NY59 AC006600.1-201ENST00000572529 153 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 VN1R91P-201ENST00000594377 169 ntBASIC0.86□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.230-201ENST00000364348 109 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.428-201ENST00000384078 102 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 RNU2-61P-201ENST00000411069 191 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 PIGPP3-201ENST00000425307 415 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.85□□□□□ -2.27
SMPD3Q9NY59 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.85□□□□□ -2.27
SMPD3Q9NY59 TRMT112P2-201ENST00000512910 132 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AC022616.4-201ENST00000522985 181 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AC011604.1-201ENST00000545978 196 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.85□□□□□ -2.27
SMPD3Q9NY59 FAM106DP-201ENST00000586416 501 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AC084781.2-201ENST00000615568 161 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 AC027279.3-201ENST00000625055 122 ntBASIC0.85□□□□□ -2.27
SMPD3Q9NY59 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
SMPD3Q9NY59 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
SMPD3Q9NY59 Y_RNA.226-201ENST00000364337 114 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 RNU6-708P-201ENST00000384217 107 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 MIR526A1-201ENST00000384897 85 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 MIR499A-201ENST00000384903 122 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 MIR518E-201ENST00000385252 88 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 RNU6-1199P-201ENST00000411249 104 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AC093019.1-201ENST00000443135 252 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 LINC01399-202ENST00000458450 244 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AC114811.1-201ENST00000507207 168 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 RNU6-436P-201ENST00000516171 114 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 SNORD111.1-201ENST00000516421 86 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 SNORD116.3-201ENST00000517176 78 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AL355375.2-201ENST00000574825 175 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 MIR4653-201ENST00000585107 83 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AL078603.1-201ENST00000603824 313 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AC004832.4-201ENST00000608952 331 ntBASIC0.84□□□□□ -2.27
SMPD3Q9NY59 AL591926.4-201ENST00000616895 298 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms