Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 Y_RNA.569-201ENST00000384749 103 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 MIR215-201ENST00000384858 110 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-1109P-201ENST00000391187 107 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AL161935.2-201ENST00000414627 60 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 MTND4LP30-201ENST00000454092 297 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 MTND5P22-201ENST00000458380 195 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 SNORA77B-201ENST00000578179 125 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 PRR13P7-201ENST00000605538 430 ntBASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.265-201ENST00000364677 108 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 Y_RNA.541-201ENST00000384640 113 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 MIR194-1-201ENST00000384892 85 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 SNORA12.1-201ENST00000390873 148 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 MIR548F4-201ENST00000408515 105 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AL135790.2-201ENST00000437701 267 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 DYNLT3P2-201ENST00000442517 295 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AC233266.1-201ENST00000454518 96 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 RNU6-548P-201ENST00000517083 115 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AC008737.2-201ENST00000599446 118 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AL360085.1-201ENST00000604713 532 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AC242852.1-201ENST00000612151 96 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AC244015.1-201ENST00000622301 99 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 AC095038.3-201ENST00000634439 195 ntBASIC1.66□□□□□ -2.14
SLC6A13Q9NSD5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1123P-201ENST00000362347 106 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-713P-201ENST00000384761 107 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 SNORA53-201ENST00000391141 249 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 AL445685.2-201ENST00000422551 342 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 snoU13.9-201ENST00000458927 103 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 MTATP8P1-201ENST00000467115 207 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 AC005908.1-201ENST00000468701 347 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 AC107393.1-201ENST00000512403 346 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 SCARNA15.1-201ENST00000516384 125 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-635P-201ENST00000516651 102 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 AC011604.1-201ENST00000545978 196 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 AC037487.3-201ENST00000606668 112 ntBASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.84-201ENST00000363011 104 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-326P-201ENST00000365480 107 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1323P-201ENST00000384025 107 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNA5SP482-201ENST00000391269 118 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 MTCO1P5-201ENST00000433573 344 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AL049830.1-201ENST00000468034 425 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-191P-201ENST00000516295 94 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU7-116P-201ENST00000516940 62 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 RNU2-31P-201ENST00000516954 155 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AL117187.1-201ENST00000555482 181 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AC136443.5-201ENST00000603741 370 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AC073349.3-201ENST00000617616 186 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AL513423.1-201ENST00000621695 132 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 AC068647.2-201ENST00000637380 353 ntBASIC1.64□□□□□ -2.15
SLC6A13Q9NSD5 SNORA72-201ENST00000384339 132 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 MIR583-201ENST00000384846 75 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 U8.13-201ENST00000390842 128 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 MIR934-201ENST00000401241 83 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 AC019129.1-201ENST00000403786 261 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 AC004965.1-201ENST00000413033 213 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 AC136628.3-201ENST00000521868 290 ntBASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SLC6A13Q9NSD5 ICE2P2-201ENST00000483823 2787 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 SNORA25.1-201ENST00000362326 128 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNA5SP363-201ENST00000365072 115 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-338P-201ENST00000383888 105 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1080P-201ENST00000383982 107 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-514P-201ENST00000384208 107 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-1203P-201ENST00000410703 110 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 PGBD4P5-201ENST00000445958 426 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 U8.19-201ENST00000459095 133 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 RNU6-327P-201ENST00000516270 127 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 MIR3618-201ENST00000580330 88 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 AP003357.1-201ENST00000604497 148 ntBASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC6A13Q9NSD5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.162-201ENST00000363683 102 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 SNORA72.4-201ENST00000384174 132 ntBASIC1.61□□□□□ -2.15
SLC6A13Q9NSD5 Y_RNA.459-201ENST00000384251 102 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms