Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Y_RNA.166-201ENST00000363730 102 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.172-201ENST00000363765 102 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU4-41P-201ENST00000364426 143 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU11-5P-201ENST00000391216 129 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 MTCYBP4-201ENST00000401524 249 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.592-201ENST00000410274 109 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNA5SP511-201ENST00000410487 115 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 Z98949.2-201ENST00000440996 144 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 UBE2V1P7-201ENST00000446395 340 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU6-559P-201ENST00000516151 98 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU6-341P-201ENST00000516973 96 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1096P-201ENST00000517089 102 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 AC004467.1-201ENST00000615678 330 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 AC127459.3-201ENST00000624328 466 ntBASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
TM9SF3Q9HD45 MIRLET7C-201ENST00000362160 84 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 MIR410-201ENST00000362222 80 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 RNU6-199P-201ENST00000362954 107 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 SNORD116-13-201ENST00000384408 92 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 SNORA69.1-201ENST00000390904 137 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 SNORA75.6-201ENST00000391318 127 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 MIR873-201ENST00000401120 77 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 PIGPP3-201ENST00000425307 415 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 MTND4P28-201ENST00000426217 387 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 CHEK2P4-201ENST00000450340 246 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 PDCD5P2-201ENST00000507570 312 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 RNU7-12P-201ENST00000516030 62 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 AC005828.6-201ENST00000606610 232 ntBASIC0.88□□□□□ -2.27
TM9SF3Q9HD45 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 SNORD115-30-201ENST00000364117 82 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.243-201ENST00000364481 109 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.577-201ENST00000384794 101 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 MIR526A1-201ENST00000384897 85 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 RNU5A-5P-201ENST00000411054 116 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 RNU6-307P-201ENST00000516743 106 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 RNU2-12P-201ENST00000517216 168 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 SNORA28-201ENST00000606769 126 ntBASIC0.87□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.36-201ENST00000362602 112 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU1-133P-201ENST00000364867 167 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.314-201ENST00000365114 102 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 SNORD116-29-201ENST00000384516 83 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 MIR625-201ENST00000385047 85 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AL354751.2-201ENST00000415471 210 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AC002429.1-201ENST00000437672 148 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RBMX2P4-201ENST00000441256 376 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AL049830.1-201ENST00000468034 425 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU6-470P-201ENST00000515954 104 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU6-322P-201ENST00000516010 103 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1278P-201ENST00000516130 107 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1337P-201ENST00000516525 95 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 RNU6-264P-201ENST00000517134 104 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AP002004.2-201ENST00000531656 154 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AC025253.1-201ENST00000613623 543 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 AC084781.2-201ENST00000615568 161 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 MIR6779-201ENST00000617283 64 ntBASIC0.86□□□□□ -2.27
TM9SF3Q9HD45 SNORD68-201ENST00000363214 84 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 MIR559-201ENST00000385188 96 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.621-201ENST00000411065 96 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC138393.2-201ENST00000414742 246 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC098614.3-201ENST00000438957 440 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC245047.7-201ENST00000440265 293 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 RPL39P39-201ENST00000455840 151 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 ELOCP24-201ENST00000456370 334 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1132P-201ENST00000459214 107 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 PSMC1P5-201ENST00000512850 177 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 RNU6-277P-201ENST00000516272 106 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 SNORA20.3-201ENST00000516880 132 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC090142.3-201ENST00000519012 385 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 FAM71BP1-201ENST00000604431 523 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC113139.1-201ENST00000605049 239 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 AL355073.2-201ENST00000612106 557 ntBASIC0.85□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1283P-201ENST00000365314 105 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 RNU6-20P-201ENST00000384106 107 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 SNORA80D-201ENST00000384488 135 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 RNU6-1105P-201ENST00000384774 107 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AL031003.1-201ENST00000404229 172 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.605-201ENST00000410577 105 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 Y_RNA.653-201ENST00000459091 95 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 SNORD79.1-201ENST00000516069 84 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 RNU6-699P-201ENST00000517081 110 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AC136628.3-201ENST00000521868 290 ntBASIC0.84□□□□□ -2.27
TM9SF3Q9HD45 AC090049.2-201ENST00000550377 109 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms