Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.26□□□□□ -1.89
ZFYVE28Q9HCC9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 U8.2-201ENST00000363156 134 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.120-201ENST00000363304 110 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNU1-112P-201ENST00000364401 164 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-1325P-201ENST00000364905 105 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.563-201ENST00000384707 108 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 AL035461.1-201ENST00000421490 332 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 AL353689.1-201ENST00000438895 199 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP148-201ENST00000516527 94 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-365P-201ENST00000517113 106 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 AC004832.5-201ENST00000608677 401 ntBASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-461P-201ENST00000364195 107 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 SNORA25B-201ENST00000365507 128 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 RNU6-1056P-201ENST00000383996 107 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP21-201ENST00000410917 96 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 RPL39P40-201ENST00000445481 146 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 RNU7-107P-201ENST00000459121 61 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 HMGN1P7-201ENST00000491722 313 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 RNU1-142P-201ENST00000516682 145 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 MIR338-201ENST00000636369 67 ntBASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.24□□□□□ -1.89
ZFYVE28Q9HCC9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 U8.1-201ENST00000362843 134 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP125-201ENST00000364843 120 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.486-201ENST00000384398 107 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 SNORA67.4-201ENST00000384688 142 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 RNA5SP467-201ENST00000391274 118 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 EDDM3CP-201ENST00000415977 425 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 AC096725.1-201ENST00000514266 313 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 RN7SKP282-201ENST00000516824 299 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 AC091178.2-201ENST00000584401 117 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 AC018630.2-201ENST00000534866 2403 ntBASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ZFYVE28Q9HCC9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 Y_RNA.294-201ENST00000364916 102 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 SNORA18.4-201ENST00000516440 124 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 MIR6079-201ENST00000635807 62 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 AC245060.5-201ENST00000610778 3293 ntBASIC3.22□□□□□ -1.89
ZFYVE28Q9HCC9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-235P-201ENST00000362644 107 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-44P-201ENST00000384045 107 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNA5SP323-201ENST00000391094 133 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AC104332.2-201ENST00000429959 156 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 SNRPGP10-201ENST00000432323 225 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AC018634.1-201ENST00000437554 401 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AC009238.1-201ENST00000442165 424 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AC009237.6-201ENST00000446969 424 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU1-131P-201ENST00000458943 161 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 snoU13.15-201ENST00000459407 104 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNA5SP76-201ENST00000516277 87 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-504P-201ENST00000516568 104 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-1291P-201ENST00000516591 104 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-341P-201ENST00000516973 96 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 RNU7-128P-201ENST00000517247 62 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AL353149.1-201ENST00000610667 244 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 AL449363.1-201ENST00000617815 186 ntBASIC3.21□□□□□ -1.9
ZFYVE28Q9HCC9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 RNU1-143P-201ENST00000516296 146 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.712-201ENST00000517011 92 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.714-201ENST00000517065 90 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 AC245166.1-201ENST00000521012 253 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 AL358944.1-201ENST00000528537 144 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 MIR3121-201ENST00000579680 77 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 U1.23-201ENST00000610293 146 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 RNU1-68P-201ENST00000615382 146 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 U1.39-201ENST00000621562 146 ntBASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.2□□□□□ -1.9
ZFYVE28Q9HCC9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 Y_RNA.242-201ENST00000364473 110 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-160P-201ENST00000384591 107 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 RNU6-1064P-201ENST00000410626 104 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 AL158147.1-201ENST00000443970 75 ntBASIC3.19□□□□□ -1.9
ZFYVE28Q9HCC9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms