Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.24□□□□□ -2.37
ALX4Q9H161 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.24□□□□□ -2.37
ALX4Q9H161 AC019235.1-201ENST00000503847 207 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 SNORA18.7-201ENST00000516910 131 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR4300-201ENST00000581016 96 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR4514-201ENST00000581410 57 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR3611-201ENST00000584484 83 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 RN7SKP299-201ENST00000606679 301 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR3674-201ENST00000636576 68 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR3974-201ENST00000637126 96 ntBASIC0.24□□□□□ -2.37
ALX4Q9H161 MIR1-1-201ENST00000362147 71 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 RNU6-454P-201ENST00000364292 107 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 Y_RNA.243-201ENST00000364481 109 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 MIR190B-201ENST00000401119 79 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 RNU6-1304P-201ENST00000411374 106 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 DLGAP5P1-201ENST00000430307 464 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 MTND1P4-201ENST00000435196 415 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 UBE2V1P7-201ENST00000446395 340 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 AL392103.1-201ENST00000447000 198 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.23□□□□□ -2.37
ALX4Q9H161 Y_RNA.704-201ENST00000516851 102 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 AC093027.1-201ENST00000546698 429 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 AF250324.2-201ENST00000608299 610 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 AC063944.3-201ENST00000609969 533 ntBASIC0.23□□□□□ -2.37
ALX4Q9H161 Y_RNA.364-201ENST00000365532 101 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 MIR140-201ENST00000385282 100 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 RNU6-332P-201ENST00000391193 108 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 RNU2-66P-201ENST00000410650 161 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 RNU6-177P-201ENST00000411257 104 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.22□□□□□ -2.37
ALX4Q9H161 RNU6-625P-201ENST00000459412 107 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.22□□□□□ -2.37
ALX4Q9H161 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.22□□□□□ -2.37
ALX4Q9H161 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.22□□□□□ -2.37
ALX4Q9H161 AC104695.3-201ENST00000604052 296 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 AC100810.6-201ENST00000638068 285 ntBASIC0.22□□□□□ -2.37
ALX4Q9H161 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.22□□□□□ -2.37
ALX4Q9H161 AC090625.1-201ENST00000357130 210 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU6-451P-201ENST00000362921 107 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNY3P3-201ENST00000363816 102 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU6-879P-201ENST00000364328 108 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU6-1310P-201ENST00000384153 107 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU6-780P-201ENST00000391030 104 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.21□□□□□ -2.38
ALX4Q9H161 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.21□□□□□ -2.38
ALX4Q9H161 USP9YP30-201ENST00000430729 455 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 SNORD123-201ENST00000459473 70 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 AC105313.1-201ENST00000509121 353 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 SNORD45.4-201ENST00000516629 73 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU1-54P-201ENST00000517181 120 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.21□□□□□ -2.38
ALX4Q9H161 MIR5701-3-201ENST00000578890 82 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 MIR5701-1-201ENST00000585138 82 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 AC023932.2-201ENST00000603176 175 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 Z99129.1-201ENST00000612510 255 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 MIR5701-2-201ENST00000615634 82 ntBASIC0.21□□□□□ -2.38
ALX4Q9H161 RNU6-1084P-201ENST00000362498 107 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 Y_RNA.48-201ENST00000362710 103 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 RNU6-1059P-201ENST00000363752 98 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 RNU6-654P-201ENST00000364373 107 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 Y_RNA.361-201ENST00000365515 120 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 SNORA2B-201ENST00000384583 137 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 MIR522-201ENST00000385071 87 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 AL390729.2-201ENST00000416137 156 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 HMGN2P32-201ENST00000444648 269 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.2□□□□□ -2.38
ALX4Q9H161 Y_RNA.681-201ENST00000516445 113 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.2□□□□□ -2.38
ALX4Q9H161 AC022616.4-201ENST00000522985 181 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 MIR3942-201ENST00000585264 109 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.2□□□□□ -2.38
ALX4Q9H161 MIR4251-201ENST00000635819 61 ntBASIC0.2□□□□□ -2.38
ALX4Q9H161 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.2□□□□□ -2.38
ALX4Q9H161 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU4-67P-201ENST00000364569 141 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU6-842P-201ENST00000384269 107 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 Y_RNA.557-201ENST00000384680 107 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU6-700P-201ENST00000391043 107 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 MIR1302-7-201ENST00000408841 72 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU6-613P-201ENST00000410412 108 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU7-87P-201ENST00000459343 62 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.19□□□□□ -2.38
ALX4Q9H161 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.19□□□□□ -2.38
ALX4Q9H161 SNORA40.9-201ENST00000515895 93 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU6-864P-201ENST00000516256 108 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 RNU6-1337P-201ENST00000516525 95 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 MTND2P38-201ENST00000522536 667 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 AL355073.2-201ENST00000612106 557 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 MIR2909-201ENST00000617113 69 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.19□□□□□ -2.38
ALX4Q9H161 MIR1321-201ENST00000637766 79 ntBASIC0.19□□□□□ -2.38
ALX4Q9H161 Y_RNA.38-201ENST00000362617 102 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 RNY1P16-201ENST00000363063 111 ntBASIC0.18□□□□□ -2.38
ALX4Q9H161 Y_RNA.253-201ENST00000364562 112 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms