Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RNU7-110P-201ENST00000516891 62 ntBASIC1.62□□□□□ -2.15
ZNF541Q9H0D2 AC104695.3-201ENST00000604052 296 ntBASIC1.62□□□□□ -2.15
ZNF541Q9H0D2 AC011373.1-201ENST00000607270 237 ntBASIC1.62□□□□□ -2.15
ZNF541Q9H0D2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.62□□□□□ -2.15
ZNF541Q9H0D2 AC018630.2-201ENST00000534866 2403 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.230-201ENST00000364348 109 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU6-1175P-201ENST00000365200 107 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU6-1227P-201ENST00000383981 107 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.446-201ENST00000384178 104 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.458-201ENST00000384240 102 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU6-440P-201ENST00000390882 105 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU6-101P-201ENST00000410323 104 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 JTBP1-201ENST00000441314 247 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RPS29P29-201ENST00000456396 171 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU6-475P-201ENST00000516073 104 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 RNU2-56P-201ENST00000516826 190 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 AL929325.1-201ENST00000603096 117 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 AL021879.1-201ENST00000611756 288 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 AC040896.1-201ENST00000613819 479 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 U6.108-201ENST00000637764 58 ntBASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
ZNF541Q9H0D2 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.143-201ENST00000363520 106 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 RNU6-21P-201ENST00000384710 107 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 MIR562-201ENST00000384894 95 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 Y_RNA.621-201ENST00000411065 96 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 AL390729.2-201ENST00000416137 156 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 AC093852.1-201ENST00000503587 266 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 RNA5SP436-201ENST00000516020 115 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 RNU6-966P-201ENST00000516479 104 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 AL356055.1-201ENST00000602528 446 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 MIR8054-201ENST00000620877 86 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 MIR6079-201ENST00000635807 62 ntBASIC1.6□□□□□ -2.15
ZNF541Q9H0D2 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
ZNF541Q9H0D2 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.124-201ENST00000363339 93 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.331-201ENST00000365267 102 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 RNU6-1080P-201ENST00000383982 107 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 AL031003.1-201ENST00000404229 172 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 AL034345.1-201ENST00000407768 123 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 RNU6-63P-201ENST00000516690 95 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 RNU6-1137P-201ENST00000517073 99 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 RNU2-12P-201ENST00000517216 168 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 AC022217.4-201ENST00000604389 163 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 PART1_1.1-201ENST00000611761 217 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 AC010205.1-201ENST00000616668 449 ntBASIC1.59□□□□□ -2.16
ZNF541Q9H0D2 RNU6-450P-201ENST00000364654 107 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 RNU6-505P-201ENST00000384427 107 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 RNU6-130P-201ENST00000411112 103 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AC024067.1-201ENST00000426199 223 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AC005534.2-201ENST00000431047 433 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 RPEP5-201ENST00000441137 268 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AL606517.2-201ENST00000442855 241 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AC005042.3-201ENST00000453230 174 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AC091021.1-201ENST00000468051 388 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 RPS26P55-201ENST00000471178 356 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.721-201ENST00000517207 102 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.58□□□□□ -2.16
ZNF541Q9H0D2 SNORD115-30-201ENST00000364117 82 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 RNU6-823P-201ENST00000391042 103 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AC005908.1-201ENST00000468701 347 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AC023790.1-201ENST00000482174 347 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AL162424.1-201ENST00000602325 221 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 AC022441.3-201ENST00000605737 136 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 SNORA28-201ENST00000606769 126 ntBASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.57□□□□□ -2.16
ZNF541Q9H0D2 MIR126-201ENST00000362291 85 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.202-201ENST00000364083 110 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.329-201ENST00000365209 107 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.462-201ENST00000384268 102 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-937P-201ENST00000384325 106 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 Y_RNA.551-201ENST00000384661 102 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-1199P-201ENST00000411249 104 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 STAG3L5P-204ENST00000443759 179 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-397P-201ENST00000516226 104 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-970P-201ENST00000516312 107 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-1337P-201ENST00000516525 95 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU6-1291P-201ENST00000516591 104 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 RNU7-128P-201ENST00000517247 62 ntBASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.56□□□□□ -2.16
ZNF541Q9H0D2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms