Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC011476.5-201ENST00000615594 130 ntBASIC1.2□□□□□ -2.22
CCSER1Q9C0I3 AC004467.1-201ENST00000615678 330 ntBASIC1.2□□□□□ -2.22
CCSER1Q9C0I3 AL160413.1-201ENST00000622780 310 ntBASIC1.2□□□□□ -2.22
CCSER1Q9C0I3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CCSER1Q9C0I3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CCSER1Q9C0I3 RNU6-450P-201ENST00000364654 107 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 RNU6-806P-201ENST00000365147 105 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 MIR873-201ENST00000401120 77 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 AC113618.1-201ENST00000416747 285 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 MTND4P19-201ENST00000446659 478 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 RNU6-1170P-201ENST00000515974 106 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 RNU7-172P-201ENST00000517125 64 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 MIR4659A-201ENST00000580269 81 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 AL138825.1-201ENST00000618587 192 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 MIR8054-201ENST00000620877 86 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 AL513423.1-201ENST00000621695 132 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 U6.92-201ENST00000636464 89 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 AC018630.2-201ENST00000534866 2403 ntBASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.238-201ENST00000364441 102 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 RNU6-407P-201ENST00000365280 104 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AL078595.1-201ENST00000404458 226 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 MCFD2P1-201ENST00000417812 300 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 SNORA31.10-201ENST00000516482 106 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 SNORA40.14-201ENST00000516543 86 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 RNA5SP102-201ENST00000516865 106 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.711-201ENST00000516993 102 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AC023442.1-201ENST00000531247 422 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 MIR5188-201ENST00000583467 113 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 MIR3171-201ENST00000584270 74 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AC044792.1-201ENST00000593294 196 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AC005176.2-201ENST00000596933 147 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 SNORA28-201ENST00000606769 126 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AC240442.1-201ENST00000616055 283 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 AL606534.2-204ENST00000635008 178 ntBASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.18□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 RNU6-626P-201ENST00000363354 107 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 SNORD115-30-201ENST00000364117 82 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 RNU6-20P-201ENST00000384106 107 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 MIR562-201ENST00000384894 95 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 SNORA12.1-201ENST00000390873 148 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 RNU2-54P-201ENST00000410299 190 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 RNU6-121P-201ENST00000410525 99 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 AC010154.1-201ENST00000425857 269 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 SUMO2P16-201ENST00000519475 264 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 RPL21P9-201ENST00000556149 474 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 MIR4295-201ENST00000585286 85 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 AC010205.1-201ENST00000616668 449 ntBASIC1.17□□□□□ -2.22
CCSER1Q9C0I3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 RNU6-117P-201ENST00000365415 107 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.512-201ENST00000384518 102 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 RNU6-440P-201ENST00000390882 105 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 RNU6-1046P-201ENST00000516538 107 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 AP003072.1-201ENST00000531740 145 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 AL390123.1-201ENST00000603216 237 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 AC006380.1-201ENST00000603598 186 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 AC073349.3-201ENST00000617616 186 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 MIR6079-201ENST00000635807 62 ntBASIC1.16□□□□□ -2.22
CCSER1Q9C0I3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 RNU6-1080P-201ENST00000383982 107 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 RNU6-102P-201ENST00000384485 104 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 U8.20-201ENST00000459445 131 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 RNU6-475P-201ENST00000516073 104 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 SNORA70.12-201ENST00000516084 153 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 RNU6-1278P-201ENST00000516130 107 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 SCARNA15.1-201ENST00000516384 125 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 AC136932.1-201ENST00000574771 208 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 RPS29P30-201ENST00000600975 111 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 HSPE1P19-201ENST00000603327 295 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 AC006157.1-201ENST00000611750 366 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 AC127459.3-201ENST00000624328 466 ntBASIC1.15□□□□□ -2.23
CCSER1Q9C0I3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 SNORD81.1-201ENST00000363064 77 ntBASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 RNU4-38P-201ENST00000364472 129 ntBASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 SNORA63C-201ENST00000364578 129 ntBASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.14□□□□□ -2.23
CCSER1Q9C0I3 Y_RNA.526-201ENST00000384572 110 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms