Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RPS15AP28-201ENST00000435088 386 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-437P-201ENST00000459408 95 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 SCARNA8-201ENST00000515924 131 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-142P-201ENST00000516682 145 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-1212P-201ENST00000517023 104 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 AL359075.3-201ENST00000613288 217 ntBASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
AMBRA1Q9C0C7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 SNORD115-3-201ENST00000363100 82 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.412-201ENST00000384001 104 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-138P-201ENST00000384093 164 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 MIR29C-201ENST00000385231 88 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RNU11-5P-201ENST00000391216 129 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 AC007064.1-201ENST00000412238 351 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RPS4XP11-201ENST00000446897 772 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP320-201ENST00000516263 124 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP148-201ENST00000516527 94 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-453P-201ENST00000516819 85 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 MIR3169-201ENST00000578032 83 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 MIR4446-201ENST00000578505 67 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 CTSLP2-204ENST00000629029 392 ntBASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
AMBRA1Q9C0C7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-862P-201ENST00000362804 105 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.229-201ENST00000364347 113 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-578P-201ENST00000390980 103 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-394P-201ENST00000410735 107 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AC018634.1-201ENST00000437554 401 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AC091021.1-201ENST00000468051 388 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-255P-201ENST00000516957 105 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 AC073413.2-201ENST00000604332 360 ntBASIC2.23□□□□□ -2.05
AMBRA1Q9C0C7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-58P-201ENST00000362413 163 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 Y_RNA.23-201ENST00000362496 106 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-23P-201ENST00000363283 107 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-275P-201ENST00000364910 107 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 MIR520G-201ENST00000385064 90 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 MT-TT-201ENST00000387460 66 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-1228P-201ENST00000391014 107 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNA5SP496-201ENST00000391240 109 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 MTND2P29-201ENST00000438595 412 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AC245047.8-201ENST00000456455 284 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU7-128P-201ENST00000517247 62 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU1-104P-201ENST00000517280 175 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AC011604.1-201ENST00000545978 196 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 MIR4658-201ENST00000584344 65 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AL031274.2-201ENST00000599419 203 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AL929325.1-201ENST00000603096 117 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AC108706.1-201ENST00000611053 297 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 AL391903.3-201ENST00000612158 163 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 U4.3-201ENST00000621047 82 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 U6.108-201ENST00000637764 58 ntBASIC2.22□□□□□ -2.05
AMBRA1Q9C0C7 RNU4-41P-201ENST00000364426 143 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.357-201ENST00000365487 109 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 SNORA67.4-201ENST00000384688 142 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 MIR515-2-201ENST00000384883 83 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 MIR515-1-201ENST00000384884 83 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 RNA5SP323-201ENST00000391094 133 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AL512604.1-201ENST00000404812 257 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 SNORA3.2-201ENST00000408221 125 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 CST2P1-201ENST00000425770 87 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-1007P-201ENST00000516586 107 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 RNA5SP137-201ENST00000516833 135 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-548P-201ENST00000517083 115 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-1096P-201ENST00000517089 102 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 MIR3144-201ENST00000579460 79 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 MIR2681-201ENST00000581814 105 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC091178.2-201ENST00000584401 117 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC104465.1-201ENST00000611365 139 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC021753.1-201ENST00000635724 168 ntBASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
AMBRA1Q9C0C7 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 RNU6-746P-201ENST00000384112 109 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 RNY3P5-201ENST00000384127 102 ntBASIC2.2□□□□□ -2.06
AMBRA1Q9C0C7 SNORA8-201ENST00000384574 139 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms