Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC078938.1-201ENST00000620993 318 ntBASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRIM54Q9BYV2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.76-201ENST00000362931 109 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.292-201ENST00000364904 97 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 RNU6-144P-201ENST00000383951 107 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 MIR520A-201ENST00000384862 85 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 RNU4-53P-201ENST00000410828 140 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC233266.1-201ENST00000454518 96 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC011604.1-201ENST00000545978 196 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC091178.2-201ENST00000584401 117 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC242852.1-201ENST00000612151 96 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC244015.1-201ENST00000622301 99 ntBASIC2.16□□□□□ -2.06
TRIM54Q9BYV2 AC008555.8-201ENST00000623602 2168 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP289-201ENST00000362332 137 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.257-201ENST00000364596 102 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 SNORA70B-201ENST00000384210 135 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 SNORA36B-201ENST00000410438 131 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP57-201ENST00000459463 123 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RPS27P21-201ENST00000486977 252 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 SNORD116-28-201ENST00000516123 91 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 AC090425.1-201ENST00000610007 140 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 ZNF702P-202ENST00000434269 1966 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 AC100821.1-201ENST00000523153 2479 ntBASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP276-201ENST00000362580 94 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 RNY1-201ENST00000364228 113 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 MIR504-201ENST00000385065 83 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP109-201ENST00000391010 116 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AL356379.1-201ENST00000414105 126 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AL358944.1-201ENST00000528537 144 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AP002004.2-201ENST00000531656 154 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AC091544.4-201ENST00000555268 342 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 MIR4287-201ENST00000579398 78 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 AC009779.6-201ENST00000603972 165 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 MIR6873-201ENST00000622788 63 ntBASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
TRIM54Q9BYV2 RNU6-112P-201ENST00000363599 104 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 SNORA63D-201ENST00000364359 132 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.262-201ENST00000364641 102 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.304-201ENST00000365011 112 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 RNU6-950P-201ENST00000384651 107 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 MIR17-201ENST00000385012 84 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 MIR1298-201ENST00000408783 112 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 RNU6-437P-201ENST00000459408 95 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 COX6CP14-201ENST00000469580 174 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 AC022217.4-201ENST00000604389 163 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 MIR7843-201ENST00000622274 79 ntBASIC2.13□□□□□ -2.07
TRIM54Q9BYV2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 MIR367-201ENST00000362299 68 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.200-201ENST00000364018 102 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 RNU6-1318P-201ENST00000365389 103 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 AL512604.1-201ENST00000404812 257 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 AL158823.1-201ENST00000418441 478 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 AL356320.1-201ENST00000429616 163 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP481-201ENST00000516814 122 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRIM54Q9BYV2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 SNORA1B-201ENST00000362535 133 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.199-201ENST00000364014 102 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 RNY4P28-201ENST00000365281 93 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 SNORA8.3-201ENST00000384679 139 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.626-201ENST00000411288 95 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 AL606517.2-201ENST00000442855 241 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 RPS27P1-201ENST00000450552 247 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 MIR4724-201ENST00000579485 89 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 MIR4524B-201ENST00000581569 115 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 AL590808.1-201ENST00000618696 141 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 AL365265.1-201ENST00000621045 234 ntBASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRIM54Q9BYV2 Y_RNA.83-201ENST00000363005 113 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP212-201ENST00000391223 107 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP100-201ENST00000410903 110 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 RNA5SP59-201ENST00000410922 110 ntBASIC2.1□□□□□ -2.07
TRIM54Q9BYV2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms